Parental gene: | ENSEEUG00000001097 |
| Aliases: | None |
| Description: | None |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_2691:92..20735(+) |
>ENSEEUG00000001097
ATGGCTAAAGCCCGGGAGAAGAGCGGTGGGAGCTCCAAGAAAGGGCTGAAACGGAAAGCCGCTAGCGAAGAACCACAGGA
GGCTGCCGTCGCTGAGGATGGAGCGACGGAAAGCGGGGTTCAACCCCCGAAAGCGGCTTCCTTCCCGCCAGGCTTCAGTA
TTTCGGAGATTAAGAACAAACAGCGACGGCACTTGATGTTCACGCGGTGGAAACAGCAACAGCGGAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCACCAAAGCCTGTCCCCAAGACTATTGACAA
CCAGCGAGTGTATGATGAAACTGTGGTAGACCCTAATGATGAAGAGGTTGCCTATGATGAAGCTACAGATGAATTTGCTT
CTTACTTCAACAGAGAGACTTCTCCCAAGATTCTTATCACAACATCAGATAGACCTCACGGGAGAACTGTAAGGCTTTGT
AATCAGCTCTCCACAGTCATACCGAACTCACATGTTTATTATCGAAGAGGACTGGCTCTCAAGAAAATTATTCCACAGTG
CATCTCAAGAGATTTCACAGATCTCATTGTTATTAATGAAGATCGTAAAACACCAAATGGATTAATTTTGAGTCACTTAC
CAAATGGCCCAACTGCTCATTTTAAGATGAGCAGTGTCCGTCTGCGTAAAGAGATTAAGAGGAGAGGCAAGGATCCCACA
GAACACATACCTGAAATCATTCTGAATAATTTTACAACACGGCTTGGTCATTCTGTTGGACGTATGTTTGCATCCCTATT
TCCCCATAACCCTCAGTTTATTGGAAGGCAGGTTGCTACATTTCACAATCAGCGTGATTATATCTTCTTCAGATTTCACA
GATATATATTCAGGAGTGAGAAGAAAGTGGGAATTCAAGAACTTGGACCACGTTTCACCTTAAAATTAAGATCTCTTCAG
AAAGGGACCTTTGATTCTAAATATGGAGAATATGAATGGGTCCATAAGCCTCGAGAAATGGATACAAGTAGAAGAAAATT
CCACTTGTGA
ATGGCTAAAGCCCGGGAGAAGAGCGGTGGGAGCTCCAAGAAAGGGCTGAAACGGAAAGCCGCTAGCGAAGAACCACAGGA
GGCTGCCGTCGCTGAGGATGGAGCGACGGAAAGCGGGGTTCAACCCCCGAAAGCGGCTTCCTTCCCGCCAGGCTTCAGTA
TTTCGGAGATTAAGAACAAACAGCGACGGCACTTGATGTTCACGCGGTGGAAACAGCAACAGCGGAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCACCAAAGCCTGTCCCCAAGACTATTGACAA
CCAGCGAGTGTATGATGAAACTGTGGTAGACCCTAATGATGAAGAGGTTGCCTATGATGAAGCTACAGATGAATTTGCTT
CTTACTTCAACAGAGAGACTTCTCCCAAGATTCTTATCACAACATCAGATAGACCTCACGGGAGAACTGTAAGGCTTTGT
AATCAGCTCTCCACAGTCATACCGAACTCACATGTTTATTATCGAAGAGGACTGGCTCTCAAGAAAATTATTCCACAGTG
CATCTCAAGAGATTTCACAGATCTCATTGTTATTAATGAAGATCGTAAAACACCAAATGGATTAATTTTGAGTCACTTAC
CAAATGGCCCAACTGCTCATTTTAAGATGAGCAGTGTCCGTCTGCGTAAAGAGATTAAGAGGAGAGGCAAGGATCCCACA
GAACACATACCTGAAATCATTCTGAATAATTTTACAACACGGCTTGGTCATTCTGTTGGACGTATGTTTGCATCCCTATT
TCCCCATAACCCTCAGTTTATTGGAAGGCAGGTTGCTACATTTCACAATCAGCGTGATTATATCTTCTTCAGATTTCACA
GATATATATTCAGGAGTGAGAAGAAAGTGGGAATTCAAGAACTTGGACCACGTTTCACCTTAAAATTAAGATCTCTTCAG
AAAGGGACCTTTGATTCTAAATATGGAGAATATGAATGGGTCCATAAGCCTCGAGAAATGGATACAAGTAGAAGAAAATT
CCACTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 13 .99 RPM |
| SRP017611_kidney | 9 .75 RPM |
| SRP017611_brain | 6 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000016028 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028187 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014803 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003729 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015969 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013600 | ortholog_many2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_17 | 95.59 | 65.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000001097 retrocopies