Parental gene: | Rpf1, ENSRNOG00000015969 |
| Aliases: | Rpf1, Bxdc5 |
| Description: | ribosome production factor 1 [Source:RefSeq peptide;Acc:NP_001094264] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 2:270895281..270909803(-) |
>ENSRNOG00000015969
ATGGCGAAGGCCGGCGAGAAAAGTGGCGGTGGTGGCAAGCGAGGCTTGAAGAGGAAAGCGCCCGCTGAAGAGCCTCAAGA
AACTGCGGTCGCGAGCGATGGGACGGCGGAGAGCGGGGTACAGTCCGCGAAAGCGGCTGCCTTCCCCCCGGGCTTCAGTA
TCTCGGAGATTAAGAACAAACAGCGGCGACACTTGATGTTCACGCGGTGGAAACAGCAGCAGCGGAAGGAAAAGTTGGCA
GCTAAGAAAAAACTTAAAAGGGAGAGAGAGGCTCTTGGTGATAAGGCTCCACCGAAGCCTGTACCCAAGACCATTGACAA
CCAACGCGTGTACGATGAGACCACAGTAGACCCCAATGATGAAGAGGTGGCTTATGATGAGGCTACAGATGAATTTGCTT
CTTACTTCAACAGACAGACGTCTCCTAAGATTCTTATCACAACCTCAGACAGACCTCATGGGAGAACAGTACGACTCTGT
GAGCAGCTCTCAACAGTTATACCGGATTCACATGTTTATTACAGAAGAGGACTGGCTCTGAAAAAAATTATCCCACAGTG
CATTGCAAGAGATTTCACAGACCTAATCGTTATTAATGAAGATCGTAAAACACCAAATGGACTTATTTTGAGTCATTTGC
CAAATGGTCCAACTGCTCATTTTAAAATGAGTAGTGTTCGTCTTCGTAAAGAAATTAAGCGACGAGGCAAAGACCCCACA
GAACATGTACCTGAGATAATTCTAAACAACTTTACCACACGGCTAGGTCACTCTATCGGACGTATGTTTGCTTCTCTCTT
TCCTCATAACCCTCAATTTATTGGAAGACAAGTTGCCACGTTCCACAATCAGCGGGATTACATCTTCTTCAGGTTTCACA
GATACATATTCAAGAGTGAAAAGAAGGTGGGAATTCAGGAACTTGGACCACGTTTTACCTTAAAATTACGATCTCTGCAG
AAGGGAACCTTTGATTCCAAGTATGGAGAGTATGAATGGGTCCATAAGCCACGGGAAATGGATACAAGTAGAAGAAAATT
CCATTTATAA
ATGGCGAAGGCCGGCGAGAAAAGTGGCGGTGGTGGCAAGCGAGGCTTGAAGAGGAAAGCGCCCGCTGAAGAGCCTCAAGA
AACTGCGGTCGCGAGCGATGGGACGGCGGAGAGCGGGGTACAGTCCGCGAAAGCGGCTGCCTTCCCCCCGGGCTTCAGTA
TCTCGGAGATTAAGAACAAACAGCGGCGACACTTGATGTTCACGCGGTGGAAACAGCAGCAGCGGAAGGAAAAGTTGGCA
GCTAAGAAAAAACTTAAAAGGGAGAGAGAGGCTCTTGGTGATAAGGCTCCACCGAAGCCTGTACCCAAGACCATTGACAA
CCAACGCGTGTACGATGAGACCACAGTAGACCCCAATGATGAAGAGGTGGCTTATGATGAGGCTACAGATGAATTTGCTT
CTTACTTCAACAGACAGACGTCTCCTAAGATTCTTATCACAACCTCAGACAGACCTCATGGGAGAACAGTACGACTCTGT
GAGCAGCTCTCAACAGTTATACCGGATTCACATGTTTATTACAGAAGAGGACTGGCTCTGAAAAAAATTATCCCACAGTG
CATTGCAAGAGATTTCACAGACCTAATCGTTATTAATGAAGATCGTAAAACACCAAATGGACTTATTTTGAGTCATTTGC
CAAATGGTCCAACTGCTCATTTTAAAATGAGTAGTGTTCGTCTTCGTAAAGAAATTAAGCGACGAGGCAAAGACCCCACA
GAACATGTACCTGAGATAATTCTAAACAACTTTACCACACGGCTAGGTCACTCTATCGGACGTATGTTTGCTTCTCTCTT
TCCTCATAACCCTCAATTTATTGGAAGACAAGTTGCCACGTTCCACAATCAGCGGGATTACATCTTCTTCAGGTTTCACA
GATACATATTCAAGAGTGAAAAGAAGGTGGGAATTCAGGAACTTGGACCACGTTTTACCTTAAAATTACGATCTCTGCAG
AAGGGAACCTTTGATTCCAAGTATGGAGAGTATGAATGGGTCCATAAGCCACGGGAAATGGATACAAGTAGAAGAAAATT
CCATTTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .81 RPM |
| SRP017611_kidney | 15 .42 RPM |
| SRP017611_brain | 10 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000001097 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000016028 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000028187 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014803 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003729 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000013600 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1372 | 71.63 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000015969 retrocopies