Parental gene: | PIGN, ENSEEUG00000005812 |
| Aliases: | None |
| Description: | phosphatidylinositol glycan anchor biosynthesis, class N [Source:HGNC Symbol;Acc:8967] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_8397:128005..248646(-) |
>ENSEEUG00000005812
ATGCTCCTGTTATTTGTTTTCGGGCTGCTCATACACTTGGTGTTCTTTGCCTCCATCTTCGACATTTATTTCACGTCTCC
ATTAGTTCATGGGATGACGCCACGGTCCACACCATTGCCTCCTCCAGCAAGAAGACTGGTGCTTTTTGTTGCTGATGGAC
TGCGGGCACATACACTTTATGAGCTTGATGAAAGTGGAAACCCTCGAGCCCCATTTATTAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTTCTTTGA
TGCTGCCAGATACAACCAAACTTTGTTTTCTCAAGTAAAAGAGGAGAAAATAGTTTTTTTCTTACATTTGTTAGGAATCG
ATACGAATGGCCATGCTCACCGGCCATCATCAAGGGACTATAAGGACAATATTAAAATGGTTGATGAAGGAATAAAAGAA
ATTGTGTCCTTGTTTAATCAGTTTTATGAAAATGATGGGAAAACAGCGTTTATTTTTACTGCTGACCATGGAATGACAGA
GTGGGGTTCCCATGGCGCTGGCCACCCTTCAGAGACTTTTACTCCTCTCGTCACTTGGGGAGCTGGAATTAAGTATCCTC
AAAAAGTATCAGCACAGCAGATTGATGATCCCCTTTTGAAAGAATGGAAACTGGAGAACTGGAAAAGACAAGATGTCAAT
CAGGCAGATATTGCACCATTAATGGCTTCTCTCATTGGAGTTCCCTTCCCTCTTAACTCAGTGGGAATCCTGCCTGTGAA
GTATCTTAACAACACTGATCTCTTCAAAGCAGAGAGCGTGCTGACAAATGCAGTTCAGATTCTTGAGCAGTTCAAGTACA
TGAAAATGGCCCAGAAAAAAGAAGTCACGTTACCATTTTTATTCACACCATTCAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTCCCTTTGCAAGGAGCTGATTCG
TCTTGCACTGGAAGGACTGTCCTACTACCACACTTACGACAGATTCTTTTTGGGCATCACTGTTGTTCTTGGTTTTGTGG
GATGGACATCTTATGCTTCTCTGTTGATCATCAAGTCTCATTCCAACCTCACCAGAGGTGGTAGTAACAAAATTAAGAAA
CCAAATCATCTCCTGACATGTACTTTTGTAGCTGTTGGCATTGCAATAGCATTTTTCCTGCTGATTCAGTCCTGTCCCTG
GACTTACTACGTGTACTGTCTGTTGCCGGTGCCAATATGGCATGCGCTTCTGAGCGAATTTCCAGTGATTGAGGACCTTG
TCAAGTCTCTGCTGACCTTTCCCCCTGGTCAATTTATTGGAAGCCTGTTAGTCTTTGGTCTGGGACTTGAAATACTAGTT
CTCAGTTTTTTCTACCGCTATATGCTTACAGCTGGACTTACAGCATTTGCGGGCTGGCCATTCGTCACTCAGCTGTGGAC
TCGAGCAAAGAGCACCTCACTGAGTTGGACTTTGTTCTCTTTGCTCCTGGCAGTGTTTCCACTGATGCCTGTTGTAGGAC
GGAAGCCAGACATCTCTGTGGTAATGGGAGCAGGCTTGCTGGTTCTTCTTCTGTCCCTGTTTGTTGTGACATCATATATA
AAAAGAAAAGATAATCTCGATGGAGAACTATTTTTGTATCTGCTACAGATACTGAGCATCATGCTTTCCATGTACACCGT
GTATAGCACGCACAGTAGTCTGCAGCGGAAACAAGGACTACCCCTTCTTAATCAGACCATTAGCTGGATCATATTAGCCT
CTTCCTTCATCCTGCCACTTCTGAGTCCCACCATCCTCTTTGAGCGGTTGTTCAGCATACTCCTTTCCTTGATGTCCACC
TACCTGCTTCTAAGCACAGGGTATGAAGCTCTCTTCCCATTAGTGCTGTCATGTTTGATGTTCATCTGGATACACATGGA
ACAAGAAACCCTGCAACAATCTGGCTTTTCCTGTAAACAGAAGGTCAACAGTATCCAGTTTGCCTACAATATTGATATAA
CTCAGTATCGAAAGCTCTATCTCGACGACATCCGTAGGGCCTTTTTCCTTGTTTTCTTCTTAGTGACAGCATTTTTTGGA
ACTGGGAATATAGCTTCTATTAACAGCTTTGATCTTGCTTCAGTCTATTGCTTTGTGACGGTGTTTAGTCCTTTTGTGAT
GGGAACCCTGATGATGTGGAAGATTTTAATCCCCTTTGTACTTGTGATGTGTGCTTTTGAAGCAGTTCAGTTAACTACCC
AGCTGTCATCAAAAAGCCTTTTTCTCATGGTTCTCGTCATATCAGACATCATGGCTTTGCACTTTTTCTTCTTGGTCCAG
GATTATGGCAGCTGGCTTGATATTGGAACA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 9 .99 RPM |
| SRP017611_kidney | 14 .44 RPM |
| SRP017611_liver | 7 .56 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_583 | 98.94 | 53.03 | Please wait, loading  |
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Download FASTA sequences of all ENSEEUG00000005812 retrocopies