Parental gene: | AP2M1, ENSEEUG00000006073 |
| Aliases: | None |
| Description: | adaptor-related protein complex 2, mu 1 subunit [Source:HGNC Symbol;Acc:564] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_5812:854..3974(+) |
>ENSEEUG00000006073
ATTCTGGATTTTGGTTACCCACAGAACTCGGAGACGGGCGCCCTGAAAACTTTCATCACCCAGCAGGGCATCAAGAGCCA
GCATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTAAGAGCTACTTGAGCGGCCCTGAGTCAAAGTTTGGGATGAATGACAAGATTCTCAT
CGAGAAGCTGGGCAAAGCCACCGCCGACGAAACAAGCAAGATTGGGAAGCAGTCTATCGCCATCGACGACTGCACCTTCC
ACCAGTGCGTGCGGCTCAGCAAGTTCGACTCGGAGCGCAGCATCAGCTTCATCCCACCAGATGGCGAGTTTGAGCTCATG
AGGTACCGCACCACCAAGGACATCATCCTGCCTTTCCGCGTGATCCCGCTGGTGCGTGAGGTGGGCCGGACCAAGCTGGA
GGTCAAGGTGGTCATCAAGTCCAACTTTAAGCCCTCACTGCTGGCTCAGAAGATCGAGGTGAGGATCCCCACCCCACTCA
ACACTAGCGGGGTACAGGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAGTGAGAACGCCATCGTGTGGAAGATC
AAGCGCATGGCTGGCATGAAGGAATCACAGATCAGCGCGGAGATTGAGCTGCTGCCCACCAACGACAAGAAGAAATGGGC
TCGGCCCCCCATTTCCATGAACTTTGAG
ATTCTGGATTTTGGTTACCCACAGAACTCGGAGACGGGCGCCCTGAAAACTTTCATCACCCAGCAGGGCATCAAGAGCCA
GCATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTAAGAGCTACTTGAGCGGCCCTGAGTCAAAGTTTGGGATGAATGACAAGATTCTCAT
CGAGAAGCTGGGCAAAGCCACCGCCGACGAAACAAGCAAGATTGGGAAGCAGTCTATCGCCATCGACGACTGCACCTTCC
ACCAGTGCGTGCGGCTCAGCAAGTTCGACTCGGAGCGCAGCATCAGCTTCATCCCACCAGATGGCGAGTTTGAGCTCATG
AGGTACCGCACCACCAAGGACATCATCCTGCCTTTCCGCGTGATCCCGCTGGTGCGTGAGGTGGGCCGGACCAAGCTGGA
GGTCAAGGTGGTCATCAAGTCCAACTTTAAGCCCTCACTGCTGGCTCAGAAGATCGAGGTGAGGATCCCCACCCCACTCA
ACACTAGCGGGGTACAGGTGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAGTGAGAACGCCATCGTGTGGAAGATC
AAGCGCATGGCTGGCATGAAGGAATCACAGATCAGCGCGGAGATTGAGCTGCTGCCCACCAACGACAAGAAGAAATGGGC
TCGGCCCCCCATTTCCATGAACTTTGAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 27 .17 RPM |
| SRP017611_kidney | 76 .14 RPM |
| SRP017611_brain | 94 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012998 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004759 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002558 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004556 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006101 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_47 | 95.81 | 68.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000006073 retrocopies