Parental gene: | LRRC28, ENSEEUG00000006720 |
| Aliases: | None |
| Description: | leucine rich repeat containing 28 [Source:HGNC Symbol;Acc:28355] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_6752:10317..78846(+) |
>ENSEEUG00000006720
CCAGAAAACCTTGCTCAGAAGCTTCCGAACCTTGTGGAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TATTGGGTCCCTTGTAAAACTTCAGTGTTTGGATCTTAGTGACAATGCCTTGGAAATTGTCTGCCCAGAAATTGGTCGTC
TGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTG
CAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCAC
TGTGGACCGAAATCTTCTATGGTGTGTGCCGCGCCACCTCTGCCAGCTGCCCAGCCTCAACGAGCTCTCCATGGCTGGAA
ACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTGCAGTATGTGTACGTGGATAACAACATTCACCTG
AAAGGCTTGCCATCCTATCTGTACAACAAAGTCATTGGGTGCAGTGGCTGTGGGGCTCCCATTCAAGTTGCTGAGGTGAA
GTTGCTGTCTTTTTCATCGGGACAACTCACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATTGGGACAGAAAGAGACCACA
TCCTGCCTCTGCAGGAGCTGGCCATGCGGAGTCTGCATCATACCTGCCACCGCCTGCTGAAGGATTTGAACTTTCTGTCT
CCAATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCACTGTCCCCTGGGACACTGTCACCGGTGTAGTGAGCCCATGTT
TACGATTGTCTATCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAAGGGAGGACAACTGTGAGTT
TTGTGGCTTACTGCTGCTCCACTCAGTGCCTGCAGACTTTTGACCTACTGAGTTGA
CCAGAAAACCTTGCTCAGAAGCTTCCGAACCTTGTGGAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
TATTGGGTCCCTTGTAAAACTTCAGTGTTTGGATCTTAGTGACAATGCCTTGGAAATTGTCTGCCCAGAAATTGGTCGTC
TGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATTTGAAGGAGCTG
CAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACCTGTGCCTTTCTCTGCAGTACCTCAC
TGTGGACCGAAATCTTCTATGGTGTGTGCCGCGCCACCTCTGCCAGCTGCCCAGCCTCAACGAGCTCTCCATGGCTGGAA
ACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTGCAGTATGTGTACGTGGATAACAACATTCACCTG
AAAGGCTTGCCATCCTATCTGTACAACAAAGTCATTGGGTGCAGTGGCTGTGGGGCTCCCATTCAAGTTGCTGAGGTGAA
GTTGCTGTCTTTTTCATCGGGACAACTCACCGTTTTCCTCCCAGCTGAGGTGAAGGCCATTGGGACAGAAAGAGACCACA
TCCTGCCTCTGCAGGAGCTGGCCATGCGGAGTCTGCATCATACCTGCCACCGCCTGCTGAAGGATTTGAACTTTCTGTCT
CCAATCTCATTACCCAGAAGTCTCCTGGAGCTGCTGCACTGTCCCCTGGGACACTGTCACCGGTGTAGTGAGCCCATGTT
TACGATTGTCTATCCCAAGCTCTTTCCCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAAGGGAGGACAACTGTGAGTT
TTGTGGCTTACTGCTGCTCCACTCAGTGCCTGCAGACTTTTGACCTACTGAGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 12 .70 RPM |
| SRP017611_kidney | 13 .32 RPM |
| SRP017611_brain | 13 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016965 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012729 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000004380 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_672 | 74.29 | 55.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000006720 retrocopies