Parental gene: | VDAC2, ENSEEUG00000008623 |
| Aliases: | None |
| Description: | voltage-dependent anion channel 2 [Source:HGNC Symbol;Acc:12672] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_6390:840..34421(+) |
>ENSEEUG00000008623
ATGAGCCGGGGTGCGGAGCCGGCTCGTCGCAGGCTGCGCGGCGGTGGCTGCTGGGAGTGTCACGTTACAATGTGTATTCC
TCCATCATATGCTGACCTTGGCAAAGCTGCCAGAGATATTTTCAACAAAGGATTTGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTCAACATCTGGTTCATCTAATACAGATACTGGTAAAGTTACTGGGACC
TTGGAGACCAAATATAAATGGTGTGAGTATGGTCTGACTTTCACAGAAAAATGGAACACTGATAACACTCTGGGAACAGA
AATTGCCATTGAAGACCAGATTTGCCAAGGTTTAAAATTGACATTTGATACCACCTTTTCACCAAACACGGGAAAGAAAA
GTGGTAAAATCAAGTCTTCTTACAAGAGAGAGTGTATAAACCTCGGTTGTGATGTTGACTTCGATTTTGCTGGACCTGCA
ATCCATGGTTCAGCTGTCTTTGGTTATGAGGGCTGGCTTGCTGGTTACCAAATGACCTTTGACAGTGCTAAATCAAAGTT
GACAAGGAATAACTTTGCAGTAGGCTACCGGACTGGGGACTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTG
GAGGATCAATTTATCAGAAAGTATGTGAAGATCTTGACACTTCAGTAAACCTTGCTTGGACTTCAGGAACCAACTGTACT
CGCTTTGGCATTGCAGCTAAGTATCAGTTGGATCCCACTGCTTCCATTTCT
ATGAGCCGGGGTGCGGAGCCGGCTCGTCGCAGGCTGCGCGGCGGTGGCTGCTGGGAGTGTCACGTTACAATGTGTATTCC
TCCATCATATGCTGACCTTGGCAAAGCTGCCAGAGATATTTTCAACAAAGGATTTGNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNGAATTTTCAACATCTGGTTCATCTAATACAGATACTGGTAAAGTTACTGGGACC
TTGGAGACCAAATATAAATGGTGTGAGTATGGTCTGACTTTCACAGAAAAATGGAACACTGATAACACTCTGGGAACAGA
AATTGCCATTGAAGACCAGATTTGCCAAGGTTTAAAATTGACATTTGATACCACCTTTTCACCAAACACGGGAAAGAAAA
GTGGTAAAATCAAGTCTTCTTACAAGAGAGAGTGTATAAACCTCGGTTGTGATGTTGACTTCGATTTTGCTGGACCTGCA
ATCCATGGTTCAGCTGTCTTTGGTTATGAGGGCTGGCTTGCTGGTTACCAAATGACCTTTGACAGTGCTAAATCAAAGTT
GACAAGGAATAACTTTGCAGTAGGCTACCGGACTGGGGACTTCCAGCTACACACTAATGTCAATGATGGGACAGAATTTG
GAGGATCAATTTATCAGAAAGTATGTGAAGATCTTGACACTTCAGTAAACCTTGCTTGGACTTCAGGAACCAACTGTACT
CGCTTTGGCATTGCAGCTAAGTATCAGTTGGATCCCACTGCTTCCATTTCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 92 .45 RPM |
| SRP017611_kidney | 322 .38 RPM |
| SRP017611_brain | 150 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000016857 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013505 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001946 | possible_ortholog | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000008068 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_192 | 71.23 | 56.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_343 | 71.23 | 56.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000008623 retrocopies