Parental gene: | PDHA1, ENSETEG00000001392 |
| Aliases: | None |
| Description: | pyruvate dehydrogenase (lipoamide) alpha 1 [Source:HGNC Symbol;Acc:8806] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_3504:45494..57760(+) |
>ENSETEG00000001392
ATGAGGAAGATGCTCGCCGCCGTCTCCCGGGTGCTGTTGGGCGCCGCCCAGAAGCCGGCTAGCAGAGTGCTGGTGGCATC
ACGTAACTTCGCCAATGATGCTACATTTGAAATTAAGAAATGCGATCTTCACCGGCTGGAAGAAGGGCCGCCCGAGACCA
CCGTGCTCACCCGGGAGGACGGGCTCCGCTACTACAGAATGATGCAGACAGTGCGCCGCATGGAGCTGAAGGCCGACCAG
CTCTACAAGCAGAAGATCATCCGGGGCTTCTGCCACCTGTGTGATGGGCAGGAAGCGTGCTGTGTGGGGCTCGAGGCTGG
TATTAATCCCACGGATCATCTTATCACCGCCTACCGGGCTCATGGCTTCACCTTTACCCGGGGGCTCACCGTCCGAGAGA
TTCTGGCAGAGCTAACAGGACGGAGAGGAGGTTGTGCAAAGGGCAAAGGCGGCTCAATGCACATGTACGCCAAGAACTTT
TATGGGGGAAATGGCATCGTCGGCGCCCAGGTGCCCCTGGGAGCTGGAATCGCTCTGGCCTGCAAATACAACGGCAAAGA
TGAGGTCTGCCTGACTCTCTACGGGGATGGTGCTGCTAACCAGGGTCAGATATTTGAAGCTTATAATATGGCGGCTTTGT
GGAAATTACCCTGTATTATCTGTGAAAATAACCGCTATGGAATGGGAACATCTGTGGAGAGAGCCGCTGCCAGCACAGAC
TACTACAAGCGAGGCGACTTCATCCCCGGGCTCCGGGTAGATGGGATGGATATCCTGTGCGTCCGGGAAGCTACAAAGTT
TGCAGCTGCTCACTGCAGGGCTGGAAAGGGGCCCATACTGATGGAGCTGCAGACCTACCGCTACCATGGCCACAGCATGA
GCGATCCTGGAGTCAGTTATCGTACCCGAGAAGAAATTCAGGAAGTCAGAAGCAAGAGTGACCCTATCATGCTTCTCAAG
GACAGGATGGTGAACAATGACCTTGCCAGCGTTGAAGAACTGAAGGAGATCGATGTGGAAGTGAGAAAGGAAATTGAGGA
CGCAGCCCAGTTTGCTACAGCAGATCCGGAGCCACCACTGGAAGAACTAGGGTACCACATCTATTCCAGCGACCCACCCT
TTGAAGTTCGTGGTGCAAATCAGTGGATCAAGTTCAAATCCATCAGTTAA
ATGAGGAAGATGCTCGCCGCCGTCTCCCGGGTGCTGTTGGGCGCCGCCCAGAAGCCGGCTAGCAGAGTGCTGGTGGCATC
ACGTAACTTCGCCAATGATGCTACATTTGAAATTAAGAAATGCGATCTTCACCGGCTGGAAGAAGGGCCGCCCGAGACCA
CCGTGCTCACCCGGGAGGACGGGCTCCGCTACTACAGAATGATGCAGACAGTGCGCCGCATGGAGCTGAAGGCCGACCAG
CTCTACAAGCAGAAGATCATCCGGGGCTTCTGCCACCTGTGTGATGGGCAGGAAGCGTGCTGTGTGGGGCTCGAGGCTGG
TATTAATCCCACGGATCATCTTATCACCGCCTACCGGGCTCATGGCTTCACCTTTACCCGGGGGCTCACCGTCCGAGAGA
TTCTGGCAGAGCTAACAGGACGGAGAGGAGGTTGTGCAAAGGGCAAAGGCGGCTCAATGCACATGTACGCCAAGAACTTT
TATGGGGGAAATGGCATCGTCGGCGCCCAGGTGCCCCTGGGAGCTGGAATCGCTCTGGCCTGCAAATACAACGGCAAAGA
TGAGGTCTGCCTGACTCTCTACGGGGATGGTGCTGCTAACCAGGGTCAGATATTTGAAGCTTATAATATGGCGGCTTTGT
GGAAATTACCCTGTATTATCTGTGAAAATAACCGCTATGGAATGGGAACATCTGTGGAGAGAGCCGCTGCCAGCACAGAC
TACTACAAGCGAGGCGACTTCATCCCCGGGCTCCGGGTAGATGGGATGGATATCCTGTGCGTCCGGGAAGCTACAAAGTT
TGCAGCTGCTCACTGCAGGGCTGGAAAGGGGCCCATACTGATGGAGCTGCAGACCTACCGCTACCATGGCCACAGCATGA
GCGATCCTGGAGTCAGTTATCGTACCCGAGAAGAAATTCAGGAAGTCAGAAGCAAGAGTGACCCTATCATGCTTCTCAAG
GACAGGATGGTGAACAATGACCTTGCCAGCGTTGAAGAACTGAAGGAGATCGATGTGGAAGTGAGAAAGGAAATTGAGGA
CGCAGCCCAGTTTGCTACAGCAGATCCGGAGCCACCACTGGAAGAACTAGGGTACCACATCTATTCCAGCGACCCACCCT
TTGAAGTTCGTGGTGCAAATCAGTGGATCAAGTTCAAATCCATCAGTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000009426 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017336 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000004196 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015375 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_1802 | 85.53 | 99.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000001392 retrocopies