Parental gene: | VBP1, ENSETEG00000017655 |
| Aliases: | None |
| Description: | von Hippel-Lindau binding protein 1 [Source:HGNC Symbol;Acc:12662] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | GeneScaffold_5358:533..26656(+) |
>ENSETEG00000017655
GAAGATGTAGATTCTTTCATGAAACAACCTGGGAATGAGACTGCAGATATAGTACTAAAGAAGTTGGACGAACAATACCA
AAAGTATAAGTTTATGGAACTCAATCTTGCTCAAAAGAAAAGGAGGCTGAAAGGACAGATTCCAGAAATCAAGCAGACTT
TAGAAATTCTCAAATACATGCAGAAGAAAAAAGAGTCCACCAAGTCACTGGAGACCAGATTCTTATTGGCAGATAACCTG
TACTGCAAAGCTTCTGTTCCTCCTACTGACAAAGTGTGTCTGTGGCTCGGGGCGAATGTAATGCTGGAATATGATATTGA
TGAAGCACAGGCACTGTTGGAAAAGAACTTAGGAACCGCCACAAAGAATCTGGATTCTCTCGAGGAAGACCTGGACTTTC
TTCGAGACCAATTTACTACCACGGAAGTCAATATGGCTAGGGTTTATAATTGGGATGTAAAAAGAAGAAACAAAGATGAT
TCTATCAAGAACAAAGCATAA
GAAGATGTAGATTCTTTCATGAAACAACCTGGGAATGAGACTGCAGATATAGTACTAAAGAAGTTGGACGAACAATACCA
AAAGTATAAGTTTATGGAACTCAATCTTGCTCAAAAGAAAAGGAGGCTGAAAGGACAGATTCCAGAAATCAAGCAGACTT
TAGAAATTCTCAAATACATGCAGAAGAAAAAAGAGTCCACCAAGTCACTGGAGACCAGATTCTTATTGGCAGATAACCTG
TACTGCAAAGCTTCTGTTCCTCCTACTGACAAAGTGTGTCTGTGGCTCGGGGCGAATGTAATGCTGGAATATGATATTGA
TGAAGCACAGGCACTGTTGGAAAAGAACTTAGGAACCGCCACAAAGAATCTGGATTCTCTCGAGGAAGACCTGGACTTTC
TTCGAGACCAATTTACTACCACGGAAGTCAATATGGCTAGGGTTTATAATTGGGATGTAAAAAGAAGAAACAAAGATGAT
TCTATCAAGAACAAAGCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000013652 | possible_ortholog | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000016144 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000016507 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000015396 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000015095 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017448 | possible_ortholog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002823 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_552 | 68.00 | 58.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_2085 | 74.70 | 98.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000017655 retrocopies