Parental gene:

ENSFCAG00000003318

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:JH408690.1:522415..539332(-)


>ENSFCAG00000003318
ATGTCTGGCAGGCCCCTGAGGATTCGCACAGTATGCTGCAGGATTGCTGACGGTTTGTGCATGCGATGCCAAAGGTTACA
GATCAAACGGGGATTCAGTGTCCGGTCCTTTGGAACAGGAACCCACGTGAAGCTCCCAGGACCAGCACCGGACAAGCCAA
ATGTTTATGATTTCAAAACTACATACGACCAGATGTACAATGATCTCCTTAGGAAGGACAAAGAACTCTATACGCAGAAC
GGCATTTTACATATGTTGGACAGAAACAAGAGAATCAAGCCCCGGCCAGAAAGGTTCCAGAACTGCAGAGACCTGTTCGA
TCTGATCCTCACCTGCGAAGAGAGGGTGTACGACCAGGTGGTGGAGGATCTGAACTCCAGAGAGCAGGAGACCTGCCAGC
CGGTGCACGTGATCAACGTGGACATCCAGGATAACCACGAAGAGGCCACGCTGGGGGCGTTCCTCATCTGCGAGCTGTGC
CAGTGTGTGAGTCAGCTGGCTAGGAGTGGCCGAAATGAGGGAAACAAGTGGCTTAACCAAGAAGCCAGGGACAGGCAGGC
CCGGACTGTTTTGCTGCACACGGTCTGCTTCTACTGA

Library Parental gene expression (RPM)
SRP017611_liver 12 .54 RPM
SRP017611_kidney 14 .74 RPM
SRP017611_brain 18 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013736 possible_ortholog 3 retrogenes
retro_amel_1930, retro_amel_292, retro_amel_84,
Dipodomys ordii ENSDORG00000011714 possible_ortholog 1 retrogene
retro_dord_433,
Erinaceus europaeus ENSEEUG00000010799 ortholog_one2one 1 retrogene
retro_eeur_648,
Microcebus murinus ENSMICG00000011016 ortholog_one2one 5 retrogenes
retro_mmur_1057, retro_mmur_1081, retro_mmur_1353, retro_mmur_890, retro_mmur_891,
Mustela putorius furo ENSMPUG00000014394 possible_ortholog 2 retrogenes
retro_mputfur_108, retro_mputfur_1408,
Sarcophilus harrisii ENSSHAG00000009747 ortholog_one2one 1 retrogene
retro_shar_32,
Tupaia belangeri ENSTBEG00000010136 ortholog_one2one 3 retrogenes
retro_tbel_1675, retro_tbel_2435, retro_tbel_2704,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_54 74.55 83.33
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Download FASTA sequences of all ENSFCAG00000003318 retrocopies