Parental gene: | MRPL45, ENSFCAG00000005808 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L45 [Source:HGNC Symbol;Acc:16651] |
| Organism: | Cat (Felis catus) |
| Coordinates: | E1:39726908..39738728(+) |
>ENSFCAG00000005808
TTGCGCCCTTTCTTCAGCCCCCGGCTCTTCACTCCTAGTCCCCATCCCAGCGGCCTTTGCGGGAACAAAATGGCAGCCCC
CACGCTGCGGGGTTTGTGTTGTTTATCCAGAGCTTTAGGATGGTGGTCTCGGCAGCCAGTCCTGGTGACTCAGTCCACAG
TTGTAGTTCCAGTGAGAACTAAAAAACGTTTCACACCACCTACTTATGAACCCAAGTACAAATCAGAAAAGGAGTTTATA
GAACATGCCCGGAAAGCGGGACTGGTCATTCCTCCGGAGCGTTTGGAGCGTCCTCTGCACCTGGCCTGTACAGCTGGTAT
CTTTGACGCCTATGTTCCTCCAGAGGGTGATGCTCGCTTGTCCTCTCTCTCGAAGGAAGGACTGGCACAGAGAAGTGAGC
GGTTGAAGAAGAAGGTGACCTCCCAATTGTCCATGATTAAGTTAAGAGAACATGATCCTAATTTCAAAATAAAGGACTTC
CCTGAAAAAGCTAAGGATATTTTTATTGAAGCTCACCTTTGTCTAAACAACTCAGACCATGACCGGCTTCATACCTTGGT
AACTGAAAACTGTTTCCCGGACATGGTCTGGGACATCAAATATAAGACCGTCCGTTGGAGCTTCGTAGAATCTTTAGAAC
CGCCTCAGGTGGTTCAGGTTCGCTGTTCAAGTCTGATGAACCATGGCAACATATATGGCCAGGTCACCGTCCGCATGCAT
TCTCAGCAGACTCTGGCCATCTATGACCGGTTTGGCCGGTTGATGTATGGACAGGAAGGTGTGCCCAGGGATGTCCTGGA
GTATGTTGTGTTTGAAAAGCATCTGGTAAATCCCTATGGGAGCTGGAGAATGCATGGCAAGGTCATCCCCCCATGGGCAC
CCCCTAAGCAGCCCATCCTTAAGACGGTGATGATCCCTGGGCCCCAGCTGAAACCTGGAGAAGACTATGAGGAGCCACAA
GGAGAG
TTGCGCCCTTTCTTCAGCCCCCGGCTCTTCACTCCTAGTCCCCATCCCAGCGGCCTTTGCGGGAACAAAATGGCAGCCCC
CACGCTGCGGGGTTTGTGTTGTTTATCCAGAGCTTTAGGATGGTGGTCTCGGCAGCCAGTCCTGGTGACTCAGTCCACAG
TTGTAGTTCCAGTGAGAACTAAAAAACGTTTCACACCACCTACTTATGAACCCAAGTACAAATCAGAAAAGGAGTTTATA
GAACATGCCCGGAAAGCGGGACTGGTCATTCCTCCGGAGCGTTTGGAGCGTCCTCTGCACCTGGCCTGTACAGCTGGTAT
CTTTGACGCCTATGTTCCTCCAGAGGGTGATGCTCGCTTGTCCTCTCTCTCGAAGGAAGGACTGGCACAGAGAAGTGAGC
GGTTGAAGAAGAAGGTGACCTCCCAATTGTCCATGATTAAGTTAAGAGAACATGATCCTAATTTCAAAATAAAGGACTTC
CCTGAAAAAGCTAAGGATATTTTTATTGAAGCTCACCTTTGTCTAAACAACTCAGACCATGACCGGCTTCATACCTTGGT
AACTGAAAACTGTTTCCCGGACATGGTCTGGGACATCAAATATAAGACCGTCCGTTGGAGCTTCGTAGAATCTTTAGAAC
CGCCTCAGGTGGTTCAGGTTCGCTGTTCAAGTCTGATGAACCATGGCAACATATATGGCCAGGTCACCGTCCGCATGCAT
TCTCAGCAGACTCTGGCCATCTATGACCGGTTTGGCCGGTTGATGTATGGACAGGAAGGTGTGCCCAGGGATGTCCTGGA
GTATGTTGTGTTTGAAAAGCATCTGGTAAATCCCTATGGGAGCTGGAGAATGCATGGCAAGGTCATCCCCCCATGGGCAC
CCCCTAAGCAGCCCATCCTTAAGACGGTGATGATCCCTGGGCCCCAGCTGAAACCTGGAGAAGACTATGAGGAGCCACAA
GGAGAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 14 .66 RPM |
| SRP017611_kidney | 23 .19 RPM |
| SRP017611_brain | 11 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000012560 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000530 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015816 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009065 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000304 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000585 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000004977 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_283 | 71.08 | 50.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1677 | 87.93 | 53.73 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000005808 retrocopies