Parental gene: | TS, ENSFCAG00000009230 |
| Aliases: | None |
| Description: | Thymidylate synthase [Source:UniProtKB/TrEMBL;Acc:Q9N1D4] |
| Organism: | Cat (Felis catus) |
| Coordinates: | D3:44657164..44666627(-) |
>ENSFCAG00000009230
ATGCCCGCTCCCGGCTCCGAGCTGCAGCGCCCGCCGGCGCAGCCTGCCGAGCAGAAGCGGGGCGCCGAACCGCAGCCGCA
GCCGCCACCCCACGGGGAGCTGCAGTACCTGGGGCAAGTGGAGCACATCCTGCGCTGCGGGTTCCAGAAGGATGACCGCA
CCGGCACCGGCACGCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGAGATGAATTTCCTTTACTGACAACCAAG
CGTGTATTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGGTTTATCAAGGGATCTACAAACGCTAAGGAACTGTCATCCAA
GGGAGTGAAAATCTGGGATGCCAATGGGTCCCGAAACTTCTTGGACAGCCTAGGATTCTCCAACAGAGAAGAAGGGGATT
TAGGCCCAGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATACAAAGATAAGGATTCAGATTATTCAGGTCAAGGA
GTAGATCAACTGCAAAAGGTGATTGACACAATCAAAACCAACCCCAATGACAGAAGAATCATCCTGTGTGGTTGGAATCC
AAAAGATCTTCCTCTGATGGCCCTGCCTCCGTGCCATGCTCTTTGCCAGTTCTACGTGGTGAATGGTGAACTGTCCTGCC
AGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTACCCTTCAACATCGCCAGCTACTCCCTGCTCACCTACATGATC
GCACACATCACAGGCCTGAAGCCAGGTGACTTCATACATACTTTGGGAGATGCGCATATTTACCTGAATCACATTGAACC
GCTAAAAATGCAGCTCCAGCGAGAACCAAGGCCTTTCCCAAAGCTCAGAATCCTTCGAAAAGTTGAGACAATTGATGACT
TCAAGGCTGAAGACTTTCAGATTGAGGGGTACAATCCTCACCCCACTATTAAAATGGATATGGCTGTT
ATGCCCGCTCCCGGCTCCGAGCTGCAGCGCCCGCCGGCGCAGCCTGCCGAGCAGAAGCGGGGCGCCGAACCGCAGCCGCA
GCCGCCACCCCACGGGGAGCTGCAGTACCTGGGGCAAGTGGAGCACATCCTGCGCTGCGGGTTCCAGAAGGATGACCGCA
CCGGCACCGGCACGCTGTCGGTGTTCGGCATGCAGGCGCGCTACAGCCTGAGAGATGAATTTCCTTTACTGACAACCAAG
CGTGTATTCTGGAAGGGTGTTTTGGAGGAGTTGCTGTGGTTTATCAAGGGATCTACAAACGCTAAGGAACTGTCATCCAA
GGGAGTGAAAATCTGGGATGCCAATGGGTCCCGAAACTTCTTGGACAGCCTAGGATTCTCCAACAGAGAAGAAGGGGATT
TAGGCCCAGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATACAAAGATAAGGATTCAGATTATTCAGGTCAAGGA
GTAGATCAACTGCAAAAGGTGATTGACACAATCAAAACCAACCCCAATGACAGAAGAATCATCCTGTGTGGTTGGAATCC
AAAAGATCTTCCTCTGATGGCCCTGCCTCCGTGCCATGCTCTTTGCCAGTTCTACGTGGTGAATGGTGAACTGTCCTGCC
AGCTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTACCCTTCAACATCGCCAGCTACTCCCTGCTCACCTACATGATC
GCACACATCACAGGCCTGAAGCCAGGTGACTTCATACATACTTTGGGAGATGCGCATATTTACCTGAATCACATTGAACC
GCTAAAAATGCAGCTCCAGCGAGAACCAAGGCCTTTCCCAAAGCTCAGAATCCTTCGAAAAGTTGAGACAATTGATGACT
TCAAGGCTGAAGACTTTCAGATTGAGGGGTACAATCCTCACCCCACTATTAAAATGGATATGGCTGTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 9 .50 RPM |
| SRP017611_kidney | 27 .10 RPM |
| SRP017611_brain | 4 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000014910 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000009507 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000021479 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005419 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000025747 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000024349 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000003102 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_339 | 61.73 | 76.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1107 | 78.29 | 55.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000009230 retrocopies