Parental gene: | ZFAND6, ENSFCAG00000012931 |
| Aliases: | None |
| Description: | zinc finger, AN1-type domain 6 [Source:HGNC Symbol;Acc:30164] |
| Organism: | Cat (Felis catus) |
| Coordinates: | B3:1485575..1500157(+) |
>ENSFCAG00000012931
ATGTGTATTTTGCCCCAGTTAAGTAAGTTGTACCTTCATCATTCTCCTCCATCAAAAAGTGTGCAACAGAGAAACATGGC
TCAAGAAACTAATCACAGCCAAGTGCCTATGCTTTGTTCTACTGGCTGCGGATTTTATGGAAACCCTCGCACAAATGGCA
TGTGTTCAGTGTGCTATAAAGAACATCTCCAAAGACAGAATAGTAGTAATGGTAGAATCAGCCCACCTGCGGCTTCTGTT
GGCACCCTGTCCGAGTCTTTCCCGGTCCAGTGCGCGGACGGCAGCGTCCCCGATGCACAGTCACCCCTAGACTCCACGTC
TGCATCCGTGCAGCCCAGCCCTGTATCAAATCAGTCGCTTTTATCCGAATCTGTAGCATCTTCCCAAGTGGACAGTACGT
CTGTGGACAAAGCAATCCCTGACACGGAAGACCTGCAAGCTTCAGTATCAGATACGGCGCAGCAGCCATCTGAAGAGCAA
AGCAAGTCTCTTGAAAAGCCAAAACAGAAAAAGAACCGCTGTTTCATGTGCAGGAAGAAAGTAGGACTTACTGGGTTTGA
ATGCCGGTGTGGACATGTGTACTGTGGTGTACATCGTTACTCAGACGTGCACAATTGCTCGTACAATTACAAAGCTGATG
CCGCGGAGAAAATCAGAAAAGAAAACCCGGTAGTTGTCGGCGAAAAGATCCAGAAG
ATGTGTATTTTGCCCCAGTTAAGTAAGTTGTACCTTCATCATTCTCCTCCATCAAAAAGTGTGCAACAGAGAAACATGGC
TCAAGAAACTAATCACAGCCAAGTGCCTATGCTTTGTTCTACTGGCTGCGGATTTTATGGAAACCCTCGCACAAATGGCA
TGTGTTCAGTGTGCTATAAAGAACATCTCCAAAGACAGAATAGTAGTAATGGTAGAATCAGCCCACCTGCGGCTTCTGTT
GGCACCCTGTCCGAGTCTTTCCCGGTCCAGTGCGCGGACGGCAGCGTCCCCGATGCACAGTCACCCCTAGACTCCACGTC
TGCATCCGTGCAGCCCAGCCCTGTATCAAATCAGTCGCTTTTATCCGAATCTGTAGCATCTTCCCAAGTGGACAGTACGT
CTGTGGACAAAGCAATCCCTGACACGGAAGACCTGCAAGCTTCAGTATCAGATACGGCGCAGCAGCCATCTGAAGAGCAA
AGCAAGTCTCTTGAAAAGCCAAAACAGAAAAAGAACCGCTGTTTCATGTGCAGGAAGAAAGTAGGACTTACTGGGTTTGA
ATGCCGGTGTGGACATGTGTACTGTGGTGTACATCGTTACTCAGACGTGCACAATTGCTCGTACAATTACAAAGCTGATG
CCGCGGAGAAAATCAGAAAAGAAAACCCGGTAGTTGTCGGCGAAAAGATCCAGAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .18 RPM |
| SRP017611_kidney | 17 .00 RPM |
| SRP017611_brain | 9 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000012321 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000009491 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000027317 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000086666 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015621 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000006722 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000019428 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000008870 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007361 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013506 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001779 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1024 | 80.12 | 73.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_1998 | 86.11 | 91.38 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000012931 retrocopies