Parental gene:

ENSFCAG00000015773

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B3:38748755..38783420(+)


>ENSFCAG00000015773
ATGGAAATGGACAAACGGATTCATTTAGAGCTGCGGAACAGGACGCCCTCTGATGTGAAAGAGCTCGTCCTGGACAACTG
CCGGTCAATCGAAGGCAAAATCGAGGGCCTCACAGATGAATTTGAAGAACTGGAGTTCTTAAGTACAATCAACGTAGGCC
TCACCTCAGTCGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGCGATAACAGAATCTCAGGGGGCCTG
GAAGTATTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAATTTAAGTGGCAACAAAATTAAAGACCTCAGCACAATAGA
GCCACTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGTGAGGTGACCAACCTGAACGACTAC

Library Parental gene expression (RPM)
SRP017611_liver 18 .40 RPM
SRP017611_kidney 49 .98 RPM
SRP017611_brain 32 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002339 possible_ortholog 2 retrogenes
retro_cjac_3305, retro_cjac_3799,
Dasypus novemcinctus ENSDNOG00000015360 ortholog_one2one 5 retrogenes
retro_dnov_1199, retro_dnov_1250, retro_dnov_1696, retro_dnov_836, retro_dnov_956,
Homo sapiens ENSG00000140350 possible_ortholog 3 retrogenes
retro_hsap_1479, retro_hsap_3117, retro_hsap_48,
Gorilla gorilla ENSGGOG00000015417 possible_ortholog 1 retrogene
retro_ggor_1134,
Nomascus leucogenys ENSNLEG00000013347 possible_ortholog 2 retrogenes
retro_nleu_15, retro_nleu_2383,
Pongo abelii ENSPPYG00000006595 possible_ortholog 2 retrogenes
retro_pabe_210, retro_pabe_2575,
Pan troglodytes ENSPTRG00000007219 possible_ortholog 2 retrogenes
retro_ptro_2108, retro_ptro_758,
Rattus norvegicus ENSRNOG00000045651 possible_ortholog 1 retrogene
retro_rnor_1043,
Sarcophilus harrisii ENSSHAG00000010906 ortholog_one2one 1 retrogene
retro_shar_540,
Tupaia belangeri ENSTBEG00000016417 ortholog_one2one 2 retrogenes
retro_tbel_4078, retro_tbel_4595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1188 76.69 100.00
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Download FASTA sequences of all ENSFCAG00000015773 retrocopies