Parental gene:

ANP32A, ENSPTRG00000007219

Aliases:None
Description:Acidic (Leucine-rich) nuclear phosphoprotein 32 family, member A [Source:UniProtKB/TrEMBL;Acc:K7BJB7]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:15:66290853..66334937(-)


>ENSPTRG00000007219
ATGGAGATGGGCAGACGGATTCATTTAGAGCTGCGGAACAGGACGCCCTCTGATGTGAAAGAACTTGTCCTGGACAACAG
TCGGTCGAATGAAGGCAAACTCGAAGGCCTCACAGATGAATTTGAAGAACTGGAATTCTTAAGTACAATCAACGTAGGCC
TCACCTCAATCGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGCGATAACAGAGTCTCAGGGGGCCTG
GAAGTATTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAATTTAAGTGGCAACAAAATTAAAGACCTCAGCACAATAGA
GCCACTGAAAAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGCGAGGTAACCAACCTGAACGACTACCGAGAAA
ATGTGTTCAAGCTCCTCCCGCAACTCACATATCTCGACGGCTATGACCGGGACGACAAGGAGGCCCCTGACTCGGATGCT
GGCTACGTGGAGGGCCTGGATGATGAGGAGGAGGATGAGGATGAGGAGGAGTATGATGAAGATGCTCAGGTAGTGGAAGA
CGAGGAGGACGAGGATGAGGAGGAGGAAGGTGAAGAGGAGGACGTGAGTGGAGAGGAGGAGGAGGATGAAGAAGGTTATA
ACGATGGAGAGGTAGATGACGAGGAAGATGAAGAAGAGCTTGGTGAAGAAGAAAGGGGTCAGAAGCGAAAACGAGAACCT
GAAGATGAGGGAGAAGATGATGACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 85 .55 RPM
SRP007412_cerebellum 142 .39 RPM
SRP007412_heart 78 .11 RPM
SRP007412_kidney 92 .71 RPM
SRP007412_liver 62 .56 RPM
SRP007412_testis 24 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002339 ortholog_one2one 2 retrogenes
retro_cjac_3305, retro_cjac_3799,
Dasypus novemcinctus ENSDNOG00000015360 possible_ortholog 5 retrogenes
retro_dnov_1199, retro_dnov_1250, retro_dnov_1696, retro_dnov_836, retro_dnov_956,
Dipodomys ordii ENSDORG00000008611 ortholog_one2many 1 retrogene
retro_dord_240,
Felis catus ENSFCAG00000015773 possible_ortholog 1 retrogene
retro_fcat_1188,
Homo sapiens ENSG00000140350 ortholog_one2one 3 retrogenes
retro_hsap_1479, retro_hsap_3117, retro_hsap_48,
Gorilla gorilla ENSGGOG00000015417 ortholog_one2one 1 retrogene
retro_ggor_1134,
Loxodonta africana ENSLAFG00000022560 ortholog_one2many 1 retrogene
retro_lafr_679,
Nomascus leucogenys ENSNLEG00000013347 ortholog_one2one 2 retrogenes
retro_nleu_15, retro_nleu_2383,
Otolemur garnettii ENSOGAG00000003058 possible_ortholog 1 retrogene
retro_ogar_2596,
Ochotona princeps ENSOPRG00000015394 possible_ortholog 2 retrogenes
retro_opri_302, retro_opri_563,
Pan troglodytes ENSPTRG00000021172 within_species_paralog 3 retrogenes
retro_ptro_1073, retro_ptro_1075, retro_ptro_40,
Rattus norvegicus ENSRNOG00000045651 possible_ortholog 1 retrogene
retro_rnor_1043,
Sarcophilus harrisii ENSSHAG00000010906 ortholog_one2many 1 retrogene
retro_shar_540,
Tupaia belangeri ENSTBEG00000016417 possible_ortholog 2 retrogenes
retro_tbel_4078, retro_tbel_4595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_758 83.60 75.40
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2. retro_ptro_2108 85.41 74.19
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Download FASTA sequences of all ENSPTRG00000007219 retrocopies