Parental gene: | RAB7A, ENSFCAG00000022971 |
| Aliases: | None |
| Description: | RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:9788] |
| Organism: | Cat (Felis catus) |
| Coordinates: | A2:56044876..56063628(-) |
>ENSFCAG00000022971
TTGGTAATTCTGTCACGCGTGTTGCTGAAGGTTATCATCCTGGGAGATTCTGGAGTTGGTAAGACATCACTCATGAACCA
GTATGTGAACAAGAAATTCAGTAATCAGTACAAAGCTACAATAGGAGCAGACTTTCTGACAAAGGAGGTGATGGTGGATG
ACAGACTAGTTACAATGCAGATCTGGGACACAGCAGGACAGGAACGGTTCCAGTCCCTTGGTGTGGCCTTCTACAGAGGC
GCAGACTGCTGCGTTCTGGTATTTGACGTCACTGCCCCCAACACATTCAAAACCCTTGATAGCTGGAGAGATGAGTTTCT
CATCCAGGCCAGTCCCCGGGATCCTGAAAACTTCCCCTTCGTGGTGTTGGGAAACAAGATTGACCTCGAAAACAGACAAG
TGGCCACAAAGCGGGCACAGGCCTGGTGCTACAGCAAAAACAACATTCCCTACTTCGAGACCAGTGCCAAGGAGGCCATC
AACGTGGAGCAGGCGTTCCAGACGATTGCACGGAATGCACTTAAACAGGAAACAGAGGTGGAGCTGTACAACGAATTCCC
CGAACCCATCAAACTGGACAAGAACGACCGGGCCAAGGCCTCGGCGGAAAGCTGCAGTTGCTGA
TTGGTAATTCTGTCACGCGTGTTGCTGAAGGTTATCATCCTGGGAGATTCTGGAGTTGGTAAGACATCACTCATGAACCA
GTATGTGAACAAGAAATTCAGTAATCAGTACAAAGCTACAATAGGAGCAGACTTTCTGACAAAGGAGGTGATGGTGGATG
ACAGACTAGTTACAATGCAGATCTGGGACACAGCAGGACAGGAACGGTTCCAGTCCCTTGGTGTGGCCTTCTACAGAGGC
GCAGACTGCTGCGTTCTGGTATTTGACGTCACTGCCCCCAACACATTCAAAACCCTTGATAGCTGGAGAGATGAGTTTCT
CATCCAGGCCAGTCCCCGGGATCCTGAAAACTTCCCCTTCGTGGTGTTGGGAAACAAGATTGACCTCGAAAACAGACAAG
TGGCCACAAAGCGGGCACAGGCCTGGTGCTACAGCAAAAACAACATTCCCTACTTCGAGACCAGTGCCAAGGAGGCCATC
AACGTGGAGCAGGCGTTCCAGACGATTGCACGGAATGCACTTAAACAGGAAACAGAGGTGGAGCTGTACAACGAATTCCC
CGAACCCATCAAACTGGACAAGAACGACCGGGCCAAGGCCTCGGCGGAAAGCTGCAGTTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 30 .63 RPM |
| SRP017611_kidney | 44 .62 RPM |
| SRP017611_brain | 52 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000365 | ortholog_one2one | 1 retrogene | |
| Meleagris gallopavo | ENSMGAG00000007208 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008454 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017333 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000079477 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000001645 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013431 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000012247 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016787 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_76 | 56.00 | 84.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_661 | 93.23 | 64.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000022971 retrocopies