Parental gene:

ENSFCAG00000030626

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:C1:61399601..61419296(-)


>ENSFCAG00000030626
ATGGCAACTGGACTGAAATTGATGAGAGCAATTAGAGTTTTTGAATTTGGTGGACCAGAAGTGCTGAAACTCCAGTCGGA
TGTGGCAGTACCAACTCCAAAAGACCACCAGGTTCTAATCAAGGTCCATGCATGTGGTGTAAACCCAGTGGAAACATATA
TTCGTTCTGGTACTCACAAGATAAAACCACTCTTACCCTATACACCTGGTTCAGATGTAGCTGGGGTAATAGAAGCTGTT
GGAGATAATGCATCTACTTTCAAGAAAGGTGACAGAGTTTTCACTACCAGCACCATCTCTGGGGGCTATGCCGAGTATGC
TCTTGCAGCAGATCACACTGTTTACCCACTGCCAGAAAAACTGGACTTTAAACAAGGAGCTGCCATCGGTATCCCATATT
TTACTGCTTATCGAGCTCTGCTCCACAGTGCCCGTGTGAAAGCTGGAGAAAGTGTTCTGGTTCATGGGGCTAGTGGAGGA
GTTGGACTGGCAGTATGCCAGATTGCTAGAGCTTATGGTTTAAAGGTTCTGGGCACAGCTGGTACCGGGGAAGGACAAAA
CATCGTTTTGCAAAATGGAGCCCATGAAGTGTTTAACCACAGAGAACATAATTATATTGATAAAATTAAGAAATCTGTTG
GTGAGAAAGGAATTGATGTGATCATTGAAATGTTAGCTAATGTAAATCTTAATAATGATTTGAATCTTCTGTCACGTGGA
GGACGAGTAATAGTTGTTGGCAGCAGAGGTCCTATTGAAATAAACCCACGGGACACCATGACAAAGGAATCTAGTATAAT
TGGGGTTGCTCTCTACTCATCAACTAAGGAGGAATTTAGGCAATATGCAGCGGCCCTTCAAGCTGGAATGGAAATTGGTT
GGCTGAAACCTGTAATAGGTTCTCAGTATTCATTGGAGAAGGTGGCCCAGGCTCATGAAAATATCATCCATAGCAGTGGG
GCTACTGGGAAAATGATTCTTCTCTTA

Library Parental gene expression (RPM)
SRP017611_brain 14 .58 RPM
SRP017611_kidney 70 .70 RPM
SRP017611_liver 64 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003162 ortholog_one2many 1 retrogene
retro_btau_1433,
Canis familiaris ENSCAFG00000020404 ortholog_many2many 1 retrogene
retro_cfam_870,
Choloepus hoffmanni ENSCHOG00000005167 ortholog_one2many 1 retrogene
retro_chof_1772,
Homo sapiens ENSG00000116791 ortholog_one2many 1 retrogene
retro_hsap_3884,
Loxodonta africana ENSLAFG00000011371 ortholog_one2many 1 retrogene
retro_lafr_527,
Macaca mulatta ENSMMUG00000014593 ortholog_one2many 2 retrogenes
retro_mmul_1026, retro_mmul_1728,
Mustela putorius furo ENSMPUG00000010969 ortholog_many2many 1 retrogene
retro_mputfur_119,
Mus musculus ENSMUSG00000028199 ortholog_one2many 1 retrogene
retro_mmus_1314,
Nomascus leucogenys ENSNLEG00000009543 ortholog_one2many 2 retrogenes
retro_nleu_1890, retro_nleu_3115,
Otolemur garnettii ENSOGAG00000011586 ortholog_many2many 1 retrogene
retro_ogar_179,
Pongo abelii ENSPPYG00000001235 ortholog_one2many 2 retrogenes
retro_pabe_1909, retro_pabe_3165,
Pan troglodytes ENSPTRG00000000865 ortholog_one2many 1 retrogene
retro_ptro_1598,
Tupaia belangeri ENSTBEG00000016750 ortholog_one2many 3 retrogenes
retro_tbel_1665, retro_tbel_2353, retro_tbel_3800,
Tarsius syrichta ENSTSYG00000004193 ortholog_one2many 2 retrogenes
retro_tsyr_1218, retro_tsyr_1884,
Tursiops truncatus ENSTTRG00000010471 ortholog_one2many 2 retrogenes
retro_ttru_555, retro_ttru_958,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1907 90.16 55.02
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Download FASTA sequences of all ENSFCAG00000030626 retrocopies