Parental gene:

YBX2, ENSG00000006047

Aliases:YBX2, CONTRIN, CSDA3, DBPC, MSY2
Description:Y box binding protein 2 [Source:HGNC Symbol;Acc:17948]
Organism:Human (Homo sapiens)
Coordinates:17:7191570..7197934(-)


>ENSG00000006047
ATGAGCGAGGTGGAGGCGGCAGCGGGGGCTACAGCGGTCCCCGCGGCGACGGTGCCCGCGACGGCGGCAGGGGTGGTAGC
GGTGGTGGTACCGGTGCCCGCAGGGGAGCCGCAGAAAGGCGGCGGGGCGGGCGGCGGGGGCGGAGCCGCCTCGGGCCCCG
CTGCTGGGACCCCCTCGGCGCCGGGCTCCCGCACCCCTGGCAATCCGGCGACGGCGGTCTCGGGAACCCCCGCCCCCCCG
GCCCGGAGTCAGGCGGACAAGCCGGTGCTGGCAATCCAAGTCCTGGGCACTGTCAAATGGTTCAACGTCCGGAATGGTTA
CGGATTCATCAACAGGAATGACACCAAGGAAGATGTCTTTGTTCACCAGACAGCTATTAAAAGAAACAACCCCAGGAAGT
TTCTGCGCAGCGTTGGAGATGGGGAGACTGTGGAATTTGATGTCGTGGAAGGAGAGAAGGGCGCAGAAGCCACTAATGTA
ACTGGGCCTGGGGGAGTACCCGTGAAGGGCAGCCGTTATGCCCCCAACCGACGTAAGTCCCGCCGATTCATCCCCCGGCC
TCCCTCAGTTGCCCCACCACCCATGGTGGCAGAGATCCCCTCGGCGGGGACAGGACCTGGCAGTAAAGGGGAGCGGGCTG
AAGACTCTGGGCAACGGCCCCGACGATGGTGCCCCCCACCCTTCTTCTACCGACGGCGGTTTGTGCGAGGCCCCCGGCCT
CCCAACCAGCAGCAGCCTATAGAGGGCACTGACAGGGTAGAACCCAAAGAGACAGCCCCATTGGAGGGGCACCAACAGCA
GGGAGATGAGCGAGTCCCCCCGCCCAGATTCCGGCCCAGGTACCGAAGGCCTTTCCGCCCCAGGCCACGCCAGCAGCCTA
CCACAGAAGGTGGGGATGGTGAGACCAAGCCCAGCCAAGGTCCCGCTGATGGTTCCCGGCCTGAGCCCCAGCGCCCACGA
AACCGCCCCTACTTCCAGCGGAGACGGCAGCAGGCCCCTGGCCCCCAGCAGGCCCCTGGCCCCCGGCAGCCCGCAGCCCC
TGAGACCTCAGCCCCTGTCAACAGTGGGGACCCCACCACCACCATCCTGGAGTGA

Library Parental gene expression (RPM)
bodymap2_liver 0 .42 RPM
bodymap2_lung 0 .32 RPM
bodymap2_breast 6 .07 RPM
bodymap2_adipose 1 .93 RPM
bodymap2_adrenal 2 .33 RPM
bodymap2_skeletal_muscle 3 .07 RPM
bodymap2_thyroid 1 .92 RPM
bodymap2_prostate 1 .89 RPM
bodymap2_colon 2 .94 RPM
bodymap2_testis 244 .41 RPM
bodymap2_brain 0 .52 RPM
bodymap2_heart 0 .72 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 1 .11 RPM
bodymap2_ovary 0 .25 RPM
bodymap2_kidney 1 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016581 ortholog_one2one 1 retrogene
retro_cjac_1473,
Homo sapiens ENSG00000060138 within_species_paralog 1 retrogene
retro_hsap_1674,
Homo sapiens ENSG00000065978 within_species_paralog 4 retrogenes
retro_hsap_1433, retro_hsap_3886, retro_hsap_4250, retro_hsap_4301,
Macaca mulatta ENSMMUG00000022712 ortholog_one2one 1 retrogene
retro_mmul_2237,
Nomascus leucogenys ENSNLEG00000008063 ortholog_one2one 1 retrogene
retro_nleu_1954,
Oryctolagus cuniculus ENSOCUG00000015064 ortholog_one2one 1 retrogene
retro_ocun_1762,
Pan troglodytes ENSPTRG00000008673 ortholog_one2one 3 retrogenes
retro_ptro_1264, retro_ptro_464, retro_ptro_50,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_637 71.75 84.34
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Download FASTA sequences of all ENSG00000006047 retrocopies