Parental gene: | YBX3, ENSG00000060138 |
| Aliases: | YBX3, CSDA, CSDA1, DBPA, ZONAB |
| Description: | Y box binding protein 3 [Source:HGNC Symbol;Acc:2428] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:10851682..10875911(-) |
>ENSG00000060138
ATGAGTGAGGCGGGCGAGGCCACCACCACCACCACCACCACCCTCCCGCAGGCTCCGACGGAGGCGGCCGCCGCGGCTCC
CCAGGACCCCGCGCCCAAGAGCCCGGTGGGCAGCGGTGCGCCCCAGGCCGCGGCCCCGGCGCCCGCCGCCCACGTCGCAG
GAAACCCCGGTGGGGACGCGGCCCCCGCAGCCACGGGCACCGCGGCCGCCGCCTCTTTAGCCACCGCCGCCGGCAGCGAA
GACGCGGAGAAAAAAGTTCTCGCCACCAAAGTCCTTGGCACTGTCAAATGGTTCAACGTCAGAAATGGATATGGATTTAT
AAATCGAAATGACACCAAAGAAGATGTATTTGTACATCAGACTGCCATCAAGAAGAATAACCCACGGAAATATCTGCGCA
GTGTAGGAGATGGAGAAACTGTAGAGTTTGATGTGGTTGAAGGAGAGAAGGGTGCAGAAGCTGCCAATGTGACTGGCCCG
GATGGAGTTCCTGTGGAAGGGAGTCGTTACGCTGCAGATCGGCGCCGTTACAGACGTGGCTACTATGGAAGGCGCCGTGG
CCCTCCCCGGAATTACGCTGGGGAGGAGGAGGAGGAAGGGAGCGGCAGCAGTGAAGGATTTGACCCCCCTGCCACTGATA
GGCAGTTCTCTGGGGCCCGGAATCAGCTGCGCCGCCCCCAGTATCGCCCTCAGTACCGGCAGCGGCGGTTCCCGCCTTAC
CACGTGGGACAGACCTTTGACCGTCGCTCACGGGTCTTACCCCATCCCAACAGAATACAGGCTGGTGAGATTGGAGAGAT
GAAGGATGGAGTCCCAGAGGGAGCACAACTTCAGGGACCGGTTCATCGAAATCCAACTTACCGCCCAAGGTACCGTAGCA
GGGGACCTCCTCGCCCACGACCTGCCCCAGCAGTTGGAGAGGCTGAAGATAAAGAAAATCAGCAAGCCACCAGTGGTCCA
AACCAGCCGTCTGTTCGCCGTGGATACCGGCGTCCCTACAATTACCGGCGTCGCCCGCGTCCTCCTAACGCTCCTTCACA
AGATGGCAAAGAGGCCAAGGCAGGTGAAGCACCAACTGAGAACCCTGCTCCACCCACCCAGCAGAGCAGTGCTGAGTAA
ATGAGTGAGGCGGGCGAGGCCACCACCACCACCACCACCACCCTCCCGCAGGCTCCGACGGAGGCGGCCGCCGCGGCTCC
CCAGGACCCCGCGCCCAAGAGCCCGGTGGGCAGCGGTGCGCCCCAGGCCGCGGCCCCGGCGCCCGCCGCCCACGTCGCAG
GAAACCCCGGTGGGGACGCGGCCCCCGCAGCCACGGGCACCGCGGCCGCCGCCTCTTTAGCCACCGCCGCCGGCAGCGAA
GACGCGGAGAAAAAAGTTCTCGCCACCAAAGTCCTTGGCACTGTCAAATGGTTCAACGTCAGAAATGGATATGGATTTAT
AAATCGAAATGACACCAAAGAAGATGTATTTGTACATCAGACTGCCATCAAGAAGAATAACCCACGGAAATATCTGCGCA
GTGTAGGAGATGGAGAAACTGTAGAGTTTGATGTGGTTGAAGGAGAGAAGGGTGCAGAAGCTGCCAATGTGACTGGCCCG
GATGGAGTTCCTGTGGAAGGGAGTCGTTACGCTGCAGATCGGCGCCGTTACAGACGTGGCTACTATGGAAGGCGCCGTGG
CCCTCCCCGGAATTACGCTGGGGAGGAGGAGGAGGAAGGGAGCGGCAGCAGTGAAGGATTTGACCCCCCTGCCACTGATA
GGCAGTTCTCTGGGGCCCGGAATCAGCTGCGCCGCCCCCAGTATCGCCCTCAGTACCGGCAGCGGCGGTTCCCGCCTTAC
CACGTGGGACAGACCTTTGACCGTCGCTCACGGGTCTTACCCCATCCCAACAGAATACAGGCTGGTGAGATTGGAGAGAT
GAAGGATGGAGTCCCAGAGGGAGCACAACTTCAGGGACCGGTTCATCGAAATCCAACTTACCGCCCAAGGTACCGTAGCA
GGGGACCTCCTCGCCCACGACCTGCCCCAGCAGTTGGAGAGGCTGAAGATAAAGAAAATCAGCAAGCCACCAGTGGTCCA
AACCAGCCGTCTGTTCGCCGTGGATACCGGCGTCCCTACAATTACCGGCGTCGCCCGCGTCCTCCTAACGCTCCTTCACA
AGATGGCAAAGAGGCCAAGGCAGGTGAAGCACCAACTGAGAACCCTGCTCCACCCACCCAGCAGAGCAGTGCTGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 18 .14 RPM |
| bodymap2_lung | 679 .40 RPM |
| bodymap2_breast | 253 .56 RPM |
| bodymap2_adipose | 442 .46 RPM |
| bodymap2_adrenal | 238 .31 RPM |
| bodymap2_skeletal_muscle | 8342 .22 RPM |
| bodymap2_thyroid | 720 .65 RPM |
| bodymap2_prostate | 380 .76 RPM |
| bodymap2_colon | 476 .92 RPM |
| bodymap2_testis | 472 .40 RPM |
| bodymap2_brain | 42 .03 RPM |
| bodymap2_heart | 406 .36 RPM |
| bodymap2_white_blood_cells | 79 .07 RPM |
| bodymap2_lymph_node | 252 .78 RPM |
| bodymap2_ovary | 207 .34 RPM |
| bodymap2_kidney | 152 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000006047 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000065978 | within_species_paralog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000004279 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012570 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1674 | 90.11 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000060138 retrocopies