Parental gene:

UTP18, ENSG00000011260

Aliases:UTP18, CGI-48, WDR50
Description:UTP18 small subunit (SSU) processome component homolog (yeast) [Source:HGNC Symbol;Acc:24274]
Organism:Human (Homo sapiens)
Coordinates:17:49337888..49375297(+)


>ENSG00000011260
ATGCCGCCGGAGCGGAGGAGACGAATGAAACTGGACCGGAGAACCGGAGCGAAGCCGAAGCGGAAGCCCGGAATGAGGCC
GGACTGGAAAGCCGGAGCGGGGCCAGGCGGGCCTCCCCAAAAGCCTGCCCCTTCATCCCAGCGGAAACCGCCGGCCCGGC
CGAGCGCGGCGGCCGCTGCGATTGCAGTCGCGGCGGCGGAGGAAGAGAGACGGCTCCGGCAGCGGAACCGCCTGAGGCTG
GAGGAGGACAAACCGGCCGTGGAGCGGTGCTTGGAGGAGCTGGTCTTCGGCGACGTCGAGAACGACGAGGACGCGTTGCT
GCGGCGTCTGCGAGGCCCGAGGGTTCAAGAACATGAAGACTCGGGTGACTCAGAAGTGGAGAATGAAGCAAAAGGTAATT
TTCCACCTCAAAAGAAGCCAGTTTGGGTGGATGAAGAAGATGAAGATGAGGAAATGGTTGACATGATGAACAATCGGTTT
CGGAAGGATATGATGAAAAATGCTAGTGAAAGTAAACTTTCGAAAGACAACCTTAAAAAGAGACTTAAAGAAGAATTCCA
ACATGCCATGGGAGGAGTACCTGCCTGGGCAGAGACTACTAAGCGGAAAACATCTTCAGATGATGAAAGTGAAGAGGATG
AAGATGATTTGTTGCAAAGGACTGGGAATTTCATATCCACATCAACTTCTCTTCCAAGAGGAATCTTGAAGATGAAGAAC
TGCCAGCATGCGAATGCTGAACGTCCTACTGTTGCTCGGATCTCATCTGTGCAGTTCCATCCCGGTGCACAGATTGTGAT
GGTTGCTGGATTAGATAATGCTGTATCACTATTTCAGGTTGATGGGAAAACAAATCCTAAAATTCAGAGCATCTATTTGG
AAAGGTTTCCAATCTTTAAGGCTTGTTTTAGTGCTAATGGGGAAGAAGTTTTAGCCACGAGTACCCACAGCAAGGTTCTT
TATGTCTATGACATGCTGGCTGGAAAGTTAATTCCTGTGCATCAAGTGAGAGGTTTGAAAGAGAAGATAGTGAGGAGCTT
TGAAGTCTCCCCAGATGGGTCCTTCTTGCTCATAAATGGCATTGCTGGATATTTGCATTTGCTAGCAATGAAGACCAAAG
AACTGATTGGAAGCATGAAAATTAATGGAAGGGTTGCAGCATCCACATTCTCTTCAGATAGTAAGAAAGTATACGCCTCT
TCGGGGGATGGAGAAGTTTATGTTTGGGATGTGAACTCAAGGAAGTGCCTTAACAGATTTGTTGATGAAGGCAGTTTATA
TGGATTAAGCATTGCCACATCTAGGAATGGACAGTATGTTGCTTGTGGTTCTAATTGTGGAGTGGTAAATATATACAATC
AAGATTCTTGTCTCCAAGAAACAAACCCAAAGCCAATAAAAGCTATAATGAACTTGGTTACAGGTGTTACTTCTCTGACC
TTCAATCCTACTACAGAAATCTTGGCAATTGCTTCAGAAAAAATGAAAGAAGCAGTCAGATTGGTTCATCTTCCTTCCTG
TACAGTATTTTCAAACTTCCCAGTCATTAAAAATAAGAATATTTCTCATGTTCATACCATGGATTTTTCTCCGAGAAGTG
GATACTTTGCCTTGGGGAATGAAAAGGGCAAGGCCCTGATGTATAGGTTGCACCATTACTCAGACTTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 16 .41 RPM
bodymap2_lung 31 .68 RPM
bodymap2_breast 18 .46 RPM
bodymap2_adipose 20 .41 RPM
bodymap2_adrenal 34 .14 RPM
bodymap2_skeletal_muscle 25 .04 RPM
bodymap2_thyroid 45 .46 RPM
bodymap2_prostate 29 .77 RPM
bodymap2_colon 23 .45 RPM
bodymap2_testis 82 .78 RPM
bodymap2_brain 31 .25 RPM
bodymap2_heart 6 .92 RPM
bodymap2_white_blood_cells 44 .65 RPM
bodymap2_lymph_node 28 .36 RPM
bodymap2_ovary 43 .01 RPM
bodymap2_kidney 37 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000001477 ortholog_one2one 1 retrogene
retro_cpor_657,
Gorilla gorilla ENSGGOG00000017061 ortholog_one2one 1 retrogene
retro_ggor_1379,
Myotis lucifugus ENSMLUG00000016938 ortholog_one2one 1 retrogene
retro_mluc_2308,
Mustela putorius furo ENSMPUG00000015582 ortholog_one2one 1 retrogene
retro_mputfur_646,
Vicugna pacos ENSVPAG00000010164 ortholog_one2one 1 retrogene
retro_vpac_170,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1882 78.26 61.33
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Download FASTA sequences of all ENSG00000011260 retrocopies