Parental gene:

EIF3I, ENSG00000084623

Aliases:EIF3I, EIF3S2, PRO2242, TRIP-1, TRIP1, eIF3-beta, eIF3-p36
Description:eukaryotic translation initiation factor 3, subunit I [Source:HGNC Symbol;Acc:3272]
Organism:Human (Homo sapiens)
Coordinates:1:32687528..32697205(+)


>ENSG00000084623
ATGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGAAGGAGACCTCCTCTTTAC
TGTGGCCAAGGACCCTATCGTCAATGTATGGTACTCTGTGAATGGTGAGAGGCTGGGCACCTACATGGGCCATACCGGAG
CTGTGTGGTGTGTGGACGCTGACTGGGACACCAAGCATGTCCTCACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGAC
TGTGAAACAGGAAAGCAGCTGGCCCTTCTCAAGACCAATTCGGCTGTCCGGACCTGCGGTTTTGACTTTGGGGGCAACAT
CATCATGTTCTCCACGGACAAGCAGATGGGCTACCAGTGCTTTGTGAGCTTTTTTGACCTGCGGGATCCGAGCCAGATTG
ACAACAATGAGCCCTACATGAAGATCCCTTGCAATGACTCTAAAATCACCAGTGCTGTTTGGGGACCCCTGGGGGAGTGC
ATCATCGCTGGCCATGAGAGTGGAGAGCTCAACCAGTATAGTGCCAAGTCTGGAGAGGTGTTGGTGAATGTTAAGGAGCA
CTCCCGGCAGATCAACGACATCCAGTTATCCAGGGACATGACCATGTTTGTGACCGCGTCCAAGGACAACACAGCCAAGC
TTTTTGACTCCACAACTCTTGAACATCAGAAGACTTTCCGGACAGAACGTCCTGTCAACTCAGCTGCCCTCTCCCCCAAC
TATGACCATGTGGTCCTGGGCGGTGGTCAGGAAGCCATGGATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGC
CAGGTTCTTCCATTTGGCCTTTGAAGAAGAGTTTGGAAGAGTCAAGGGTCACTTTGGACCTATCAACAGTGTTGCCTTCC
ATCCTGATGGCAAGAGCTACAGCAGCGGCGGCGAAGATGGTTACGTCCGTATCCATTACTTCGACCCACAGTACTTCGAA
TTTGAGTTTGAGGCTTAA

Library Parental gene expression (RPM)
bodymap2_liver 63 .82 RPM
bodymap2_lung 132 .52 RPM
bodymap2_breast 76 .19 RPM
bodymap2_adipose 96 .13 RPM
bodymap2_adrenal 113 .40 RPM
bodymap2_skeletal_muscle 130 .68 RPM
bodymap2_thyroid 100 .84 RPM
bodymap2_prostate 123 .60 RPM
bodymap2_colon 95 .44 RPM
bodymap2_testis 73 .66 RPM
bodymap2_brain 45 .97 RPM
bodymap2_heart 43 .99 RPM
bodymap2_white_blood_cells 102 .57 RPM
bodymap2_lymph_node 101 .14 RPM
bodymap2_ovary 100 .84 RPM
bodymap2_kidney 84 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000010674 ortholog_one2one 1 retrogene
retro_cfam_321,
Callithrix jacchus ENSCJAG00000006810 ortholog_one2one 1 retrogene
retro_cjac_3104,
Echinops telfairi ENSETEG00000008047 ortholog_one2one 1 retrogene
retro_etel_1497,
Homo sapiens ENSG00000023734 within_species_paralog 2 retrogenes
retro_hsap_2092, retro_hsap_3723,
Gorilla gorilla ENSGGOG00000001579 ortholog_one2one 3 retrogenes
retro_ggor_2540, retro_ggor_2615, retro_ggor_2623,
Loxodonta africana ENSLAFG00000017026 ortholog_one2one 1 retrogene
retro_lafr_1073,
Macaca mulatta ENSMMUG00000006119 ortholog_one2one 2 retrogenes
retro_mmul_1730, retro_mmul_1733,
Monodelphis domestica ENSMODG00000017481 ortholog_one2one 2 retrogenes
retro_mdom_1054, retro_mdom_822,
Nomascus leucogenys ENSNLEG00000002426 ortholog_one2one 2 retrogenes
retro_nleu_1129, retro_nleu_1135,
Pongo abelii ENSPPYG00000001598 ortholog_one2one 2 retrogenes
retro_pabe_3169, retro_pabe_3175,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3888 79.75 98.46
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2. retro_hsap_3894 68.98 74.46
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Download FASTA sequences of all ENSG00000084623 retrocopies