Parental gene: | EIF3I, ENSPPYG00000001598 |
| Aliases: | EIF3I, EIF3S2, eIF-3-beta |
| Description: | eukaryotic translation initiation factor 3 subunit I [Source:RefSeq peptide;Acc:NP_001126286] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:198007403..198018792(-) |
>ENSPPYG00000001598
ATGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGAAGGAGACCTCCTTTTTAC
TGTGGCCAAGGACCCTATCGTCAATGTATGGTACTCTGTGAATGGTGAGAGGCTGGGCACCTACATGGGCCATACCGGAG
CTGTGTGGTGTGTGGACGCTGACTGGGACACCAAGCATGTCCTCACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGAC
TGTGAAACAGGAAAGCAACTGGCCCTTCTCAAGACCAACTCGGCTGTCCGGACCTGCGGTTTTGACTTTGGGGGCAACAT
CATCATGTTCTCCACAGACAAGCAGATGGGCTACCAGTGCTTTGTGAGCTTTTTTGACCTGCGGGATCCGAGCCAGATTG
ACAACAATGAGCCCTACATGAAGATCCCTTGCAATGACTCTAAAATCACCAGTGCTGTTTGGGGACCCCTGGGGGAGTGC
ATCATCGCTGGCCATGAGAGTGGAGAGCTCAACCAGTATAGTGCCAAGTCTGGAGAGGTGTTGGTGAATGTTAAGGAGCA
CTCCCGGCAGATCAACGACATCCAGTTATCCAGGGACATGACCATGTTTGTGACCGCATCCAAGGACAACACAGCCAAGC
TTTTTGACTCCACAACTCTTGAACATCAGAAGACTTTCCGGACAGAACGTCCCGTCAACTCAGCTGCCCTCTCCCCCAAC
TATGACCATGTGGTCCTGGGCGGTGGTCAGGAAGCCATGGATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGC
CAGGTTCTTCCATTTGGCCTTTGAAGAAGAGTTTGGAAGAGTTAAGGGTCACTTTGGACCTATCAACAGTGTTGCCTTCC
ATCCTGATGGCAAGAGCTACAGCAGTGGTGGTGAAGATGGTTACGTCCGTATCCATTACTTTGACCCACAGTACTTCGAA
TTTGAGTTTGAGGCTTAA
ATGAAGCCGATCCTACTGCAGGGCCATGAGCGGTCCATTACGCAGATTAAGTATAACCGCGAAGGAGACCTCCTTTTTAC
TGTGGCCAAGGACCCTATCGTCAATGTATGGTACTCTGTGAATGGTGAGAGGCTGGGCACCTACATGGGCCATACCGGAG
CTGTGTGGTGTGTGGACGCTGACTGGGACACCAAGCATGTCCTCACTGGCTCAGCTGACAACAGCTGTCGTCTCTGGGAC
TGTGAAACAGGAAAGCAACTGGCCCTTCTCAAGACCAACTCGGCTGTCCGGACCTGCGGTTTTGACTTTGGGGGCAACAT
CATCATGTTCTCCACAGACAAGCAGATGGGCTACCAGTGCTTTGTGAGCTTTTTTGACCTGCGGGATCCGAGCCAGATTG
ACAACAATGAGCCCTACATGAAGATCCCTTGCAATGACTCTAAAATCACCAGTGCTGTTTGGGGACCCCTGGGGGAGTGC
ATCATCGCTGGCCATGAGAGTGGAGAGCTCAACCAGTATAGTGCCAAGTCTGGAGAGGTGTTGGTGAATGTTAAGGAGCA
CTCCCGGCAGATCAACGACATCCAGTTATCCAGGGACATGACCATGTTTGTGACCGCATCCAAGGACAACACAGCCAAGC
TTTTTGACTCCACAACTCTTGAACATCAGAAGACTTTCCGGACAGAACGTCCCGTCAACTCAGCTGCCCTCTCCCCCAAC
TATGACCATGTGGTCCTGGGCGGTGGTCAGGAAGCCATGGATGTAACCACAACCTCCACCAGGATTGGCAAGTTTGAGGC
CAGGTTCTTCCATTTGGCCTTTGAAGAAGAGTTTGGAAGAGTTAAGGGTCACTTTGGACCTATCAACAGTGTTGCCTTCC
ATCCTGATGGCAAGAGCTACAGCAGTGGTGGTGAAGATGGTTACGTCCGTATCCATTACTTTGACCCACAGTACTTCGAA
TTTGAGTTTGAGGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 48 .10 RPM |
| SRP007412_cerebellum | 36 .24 RPM |
| SRP007412_heart | 29 .92 RPM |
| SRP007412_kidney | 65 .53 RPM |
| SRP007412_liver | 52 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010674 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006810 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008047 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000084623 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001579 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000017026 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006119 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000017481 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002426 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004334 | within_species_paralog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3169 | 78.82 | 98.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3175 | 69.95 | 58.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001598 retrocopies