Parental gene: | EXOSC3, ENSG00000107371 |
| Aliases: | EXOSC3, PCH1B, RRP40, Rrp40p, bA3J10.7, hRrp-40, p10 |
| Description: | exosome component 3 [Source:HGNC Symbol;Acc:17944] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 9:37766974..37801434(-) |
>ENSG00000107371
ATGGCCGAACCTGCGTCTGTCGCGGCTGAATCTCTCGCGGGCAGCAGGGCGCGCGCTGCACGCACAGTACTAGGTCAGGT
GGTGCTCCCGGGTGAGGAGCTGCTCCTGCCGGAACAGGAGGACGCGGAAGGCCCTGGGGGTGCAGTGGAGCGACCGTTGA
GCCTGAATGCTAGAGCGTGCTCGCGGGTGCGCGTTGTATGCGGTCCGGGCCTTCGGCGCTGTGGGGACCGCCTGCTGGTC
ACCAAGTGCGGCCGCCTCCGTCACAAGGAGCCCGGCAGTGGCAGCGGCGGCGGTGTTTACTGGGTGGACTCTCAGCAGAA
GCGGTATGTTCCAGTAAAAGGAGACCATGTGATTGGCATAGTGACAGCTAAATCTGGAGATATATTCAAAGTTGATGTTG
GAGGGAGTGAGCCAGCTTCTTTGTCTTACTTGTCATTTGAAGGTGCAACTAAAAGAAACAGACCAAATGTGCAGGTTGGA
GATCTCATCTATGGCCAGTTTGTGGTTGCTAATAAAGACATGGAACCAGAGATGGTCTGTATTGACAGCTGTGGACGAGC
CAATGGAATGGGTGTCATTGGACAGGATGGTCTGCTTTTTAAAGTGACTCTGGGCTTAATTAGAAAGCTATTAGCTCCAG
ATTGTGAAATCATACAGGAAGTGGGAAAACTCTATCCACTGGAGATAGTATTTGGAATGAATGGAAGAATATGGGTTAAG
GCAAAAACCATCCAGCAGACTTTAATTTTGGCAAACATTTTAGAAGCTTGTGAACACATGACGTCAGATCAAAGAAAACA
GATCTTCTCCAGATTGGCAGAAAGTTGA
ATGGCCGAACCTGCGTCTGTCGCGGCTGAATCTCTCGCGGGCAGCAGGGCGCGCGCTGCACGCACAGTACTAGGTCAGGT
GGTGCTCCCGGGTGAGGAGCTGCTCCTGCCGGAACAGGAGGACGCGGAAGGCCCTGGGGGTGCAGTGGAGCGACCGTTGA
GCCTGAATGCTAGAGCGTGCTCGCGGGTGCGCGTTGTATGCGGTCCGGGCCTTCGGCGCTGTGGGGACCGCCTGCTGGTC
ACCAAGTGCGGCCGCCTCCGTCACAAGGAGCCCGGCAGTGGCAGCGGCGGCGGTGTTTACTGGGTGGACTCTCAGCAGAA
GCGGTATGTTCCAGTAAAAGGAGACCATGTGATTGGCATAGTGACAGCTAAATCTGGAGATATATTCAAAGTTGATGTTG
GAGGGAGTGAGCCAGCTTCTTTGTCTTACTTGTCATTTGAAGGTGCAACTAAAAGAAACAGACCAAATGTGCAGGTTGGA
GATCTCATCTATGGCCAGTTTGTGGTTGCTAATAAAGACATGGAACCAGAGATGGTCTGTATTGACAGCTGTGGACGAGC
CAATGGAATGGGTGTCATTGGACAGGATGGTCTGCTTTTTAAAGTGACTCTGGGCTTAATTAGAAAGCTATTAGCTCCAG
ATTGTGAAATCATACAGGAAGTGGGAAAACTCTATCCACTGGAGATAGTATTTGGAATGAATGGAAGAATATGGGTTAAG
GCAAAAACCATCCAGCAGACTTTAATTTTGGCAAACATTTTAGAAGCTTGTGAACACATGACGTCAGATCAAAGAAAACA
GATCTTCTCCAGATTGGCAGAAAGTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 7 .46 RPM |
| bodymap2_lung | 5 .56 RPM |
| bodymap2_breast | 13 .44 RPM |
| bodymap2_adipose | 9 .44 RPM |
| bodymap2_adrenal | 13 .94 RPM |
| bodymap2_skeletal_muscle | 3 .20 RPM |
| bodymap2_thyroid | 13 .65 RPM |
| bodymap2_prostate | 13 .96 RPM |
| bodymap2_colon | 17 .15 RPM |
| bodymap2_testis | 23 .75 RPM |
| bodymap2_brain | 7 .69 RPM |
| bodymap2_heart | 4 .49 RPM |
| bodymap2_white_blood_cells | 15 .67 RPM |
| bodymap2_lymph_node | 12 .85 RPM |
| bodymap2_ovary | 18 .29 RPM |
| bodymap2_kidney | 11 .25 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000006970 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003529 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000000886 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019055 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000020952 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2504 | 86.90 | 60.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000107371 retrocopies