Parental gene:

DDX50, ENSG00000107625

Aliases:DDX50, GU2, GUB, RH-II/GuB, mcdrh
Description:DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 [Source:HGNC Symbol;Acc:17906]
Organism:Human (Homo sapiens)
Coordinates:10:70661033..70706603(+)


>ENSG00000107625
ATGCCTGGGAAACTCCTCTGGGGGGACATTATGGAGCTGGAAGCACCCTTGGAGGAGTCCGAGAGCCAGAAGAAGGAGAG
GCAAAAGAGTGACAGAAGGAAGTCAAGGCACCATTATGACTCGGATGAGAAATCAGAAACAAGAGAAAATGGTGTTACAG
ATGACCTGGATGCTCCCAAGGCCAAAAAATCTAAAATGAAAGAGAAGCTAAATGGAGACACTGAAGAAGGATTTAATAGA
CTTTCAGATGAATTCTCCAAATCTCATAAGTCAAGAAGAAAAGATCTACCAAATGGAGATATAGATGAATATGAAAAAAA
ATCAAAGCGAGTATCATCTTTAGATACTTCTACTCATAAATCAAGTGATAATAAACTAGAGGAGACCTTAACACGTGAAC
AGAAAGAAGGAGCCTTCTCCAATTTTCCTATTTCTGAAGAGACTATAAAGCTTCTGAAAGGTCGAGGGGTAACATATCTC
TTTCCTATTCAAGTTAAGACCTTTGGTCCTGTATATGAAGGAAAAGATTTAATAGCTCAAGCACGGACAGGAACAGGAAA
GACATTCTCTTTTGCCATCCCCTTAATTGAAAGACTCCAAAGAAATCAAGAAACAATTAAAAAAAGCCGCTCACCAAAGG
TACTTGTTTTGGCTCCAACAAGGGAACTGGCAAACCAAGTAGCCAAAGACTTCAAAGATATAACTAGGAAACTCAGCGTG
GCGTGTTTTTATGGTGGAACATCATATCAAAGCCAAATTAATCATATTCGAAATGGTATTGACATCTTGGTTGGAACACC
TGGTCGTATCAAAGACCATCTGCAGAGTGGCCGATTGGATCTTTCTAAACTGCGACATGTTGTGCTTGATGAAGTGGATC
AGATGTTAGATTTAGGTTTCGCTGAACAAGTTGAAGATATTATTCATGAATCCTACAAAACTGATTCTGAAGACAATCCT
CAGACTTTACTTTTTTCTGCAACTTGCCCACAGTGGGTATACAAAGTTGCAAAAAAATACATGAAATCCAGATATGAACA
GGTTGACCTTGTTGGAAAAATGACTCAAAAGGCTGCAACTACTGTGGAACATTTGGCCATCCAGTGTCATTGGTCTCAGA
GGCCAGCAGTTATTGGAGATGTCCTTCAAGTCTACAGTGGGTCTGAAGGGAGGGCTATTATTTTCTGTGAGACCAAGAAG
AATGTAACTGAAATGGCCATGAATCCACACATAAAACAGAATGCCCAGTGTTTACATGGGGACATTGCACAGTCACAAAG
AGAAATTACACTAAAAGGCTTCAGAGAAGGTAGTTTTAAAGTTTTGGTGGCAACCAATGTGGCTGCCCGTGGTTTGGACA
TTCCTGAAGTTGACCTGGTGATTCAAAGTTCTCCTCCTCAGGATGTTGAGTCCTATATCCATCGCTCTGGACGCACAGGT
AGAGCTGGACGGACAGGGATTTGTATATGTTTTTATCAACCAAGAGAAAGAGGTCAACTAAGATATGTGGAACAAAAAGC
AGGAATTACTTTTAAACGTGTAGGTGTTCCTTCTACAATGGATTTAGTTAAATCTAAAAGCATGGATGCCATCAGGTCTC
TGGCTTCCGTTTCTTACGCTGCTGTTGATTTTTTCCGACCATCAGCTCAGAGACTGATAGAAGAGAAAGGTGCAGTGGAT
GCATTGGCTGCAGCTTTAGCCCACATTTCTGGTGCATCAAGCTTTGAACCACGATCTTTGATCACCTCTGATAAGGGGTT
TGTGACCATGACTCTGGAAAGCCTAGAGGAAATACAGGATGTCAGCTGTGCTTGGAAAGAACTTAACAGAAAGCTGAGTA
GTAATGCAGTGTCTCAGATTACCAGAATGTGCCTCCTGAAAGGAAATATGGGTGTTTGCTTTGATGTTCCTACAACTGAG
TCAGAAAGGTTACAGGCAGAGTGGCATGATTCCGACTGGATACTCTCAGTGCCAGCCAAATTACCTGAAATTGAAGAATA
TTATGATGGAAACACATCTTCTAATTCCAGACAGAGGAGTGGCTGGTCAAGTGGTCGATCAGGCCGGTCAGGCCGGTCAG
GTGGTCGATCTGGCGGCCGGTCAGGTAGACAGAGTCGACAAGGAAGTCGCTCAGGAAGTCGACAAGATGGTAGAAGACGA
AGTGGGAATAGAAATCGATCAAGAAGTGGGGGCCACAAACGGAGTTTTGACTGA

Library Parental gene expression (RPM)
bodymap2_adipose 40 .03 RPM
bodymap2_adrenal 49 .29 RPM
bodymap2_brain 21 .85 RPM
bodymap2_breast 39 .11 RPM
bodymap2_colon 73 .42 RPM
bodymap2_heart 23 .37 RPM
bodymap2_kidney 37 .02 RPM
bodymap2_liver 9 .93 RPM
bodymap2_lung 34 .60 RPM
bodymap2_lymph_node 33 .37 RPM
bodymap2_ovary 79 .40 RPM
bodymap2_prostate 74 .58 RPM
bodymap2_skeletal_muscle 45 .49 RPM
bodymap2_testis 78 .09 RPM
bodymap2_thyroid 59 .94 RPM
bodymap2_white_blood_cells 48 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018844 ortholog_one2one 1 retrogene
retro_cjac_1298,
Homo sapiens ENSG00000080007 within_species_paralog 1 retrogene
retro_hsap_76,
Macaca mulatta ENSMMUG00000001006 ortholog_one2one 1 retrogene
retro_mmul_982,
Mus musculus ENSMUSG00000020076 ortholog_one2one 1 retrogene
retro_mmus_3362,
Nomascus leucogenys ENSNLEG00000011631 ortholog_one2one 2 retrogenes
retro_nleu_1300, retro_nleu_609,
Otolemur garnettii ENSOGAG00000001844 ortholog_one2one 2 retrogenes
retro_ogar_1492, retro_ogar_555,
Pongo abelii ENSPPYG00000002390 ortholog_one2one 3 retrogenes
retro_pabe_2007, retro_pabe_2369, retro_pabe_2418,
Pan troglodytes ENSPTRG00000002562 ortholog_one2one 2 retrogenes
retro_ptro_1536, retro_ptro_1938,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2089 88.29 62.28
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2. retro_hsap_2866 82.08 64.72
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Download FASTA sequences of all ENSG00000107625 retrocopies