Parental gene:

CDC20, ENSG00000117399

Aliases:CDC20, CDC20A, bA276H19.3, p55CDC
Description:cell division cycle 20 [Source:HGNC Symbol;Acc:1723]
Organism:Human (Homo sapiens)
Coordinates:1:43824625..43828874(+)


>ENSG00000117399
ATGGCACAGTTCGCGTTCGAGAGTGACCTGCACTCGCTGCTTCAGCTGGATGCACCCATCCCCAATGCACCCCCTGCGCG
CTGGCAGCGCAAAGCCAAGGAAGCCGCAGGCCCGGCCCCCTCACCCATGCGGGCCGCCAACCGATCCCACAGCGCCGGCA
GGACTCCGGGCCGAACTCCTGGCAAATCCAGTTCCAAGGTTCAGACCACTCCTAGCAAACCTGGCGGTGACCGCTATATC
CCCCATCGCAGTGCTGCCCAGATGGAGGTGGCCAGCTTCCTCCTGAGCAAGGAGAACCAGCCTGAAAACAGCCAGACGCC
CACCAAGAAGGAACATCAGAAAGCCTGGGCTTTGAACCTGAACGGTTTTGATGTAGAGGAAGCCAAGATCCTTCGGCTCA
GTGGAAAACCACAAAATGCGCCAGAGGGTTATCAGAACAGACTGAAAGTACTCTACAGCCAAAAGGCCACTCCTGGCTCC
AGCCGGAAGACCTGCCGTTACATTCCTTCCCTGCCAGACCGTATCCTGGATGCGCCTGAAATCCGAAATGACTATTACCT
GAACCTTGTGGATTGGAGTTCTGGGAATGTACTGGCCGTGGCACTGGACAACAGTGTGTACCTGTGGAGTGCAAGCTCTG
GTGACATCCTGCAGCTTTTGCAAATGGAGCAGCCTGGGGAATATATATCCTCTGTGGCCTGGATCAAAGAGGGCAACTAC
TTGGCTGTGGGCACCAGCAGTGCTGAGGTGCAGCTATGGGATGTGCAGCAGCAGAAACGGCTTCGAAATATGACCAGTCA
CTCTGCCCGAGTGGGCTCCCTAAGCTGGAACAGCTATATCCTGTCCAGTGGTTCACGTTCTGGCCACATCCACCACCATG
ATGTTCGGGTAGCAGAACACCATGTGGCCACACTGAGTGGCCACAGCCAGGAAGTGTGTGGGCTGCGCTGGGCCCCAGAT
GGACGACATTTGGCCAGTGGTGGTAATGATAACTTGGTCAATGTGTGGCCTAGTGCTCCTGGAGAGGGTGGCTGGGTTCC
TCTGCAGACATTCACCCAGCATCAAGGGGCTGTCAAGGCCGTAGCATGGTGTCCCTGGCAGTCCAATGTCCTGGCAACAG
GAGGGGGCACCAGTGATCGACACATTCGCATCTGGAATGTGTGCTCTGGGGCCTGTCTGAGTGCCGTGGATGCCCATTCC
CAGGTGTGCTCCATCCTCTGGTCTCCCCATTACAAGGAGCTCATCTCAGGCCATGGCTTTGCACAGAACCAGCTAGTTAT
TTGGAAGTACCCAACCATGGCCAAGGTGGCTGAACTCAAAGGTCACACATCCCGGGTCCTGAGTCTGACCATGAGCCCAG
ATGGGGCCACAGTGGCATCCGCAGCAGCAGATGAGACCCTGAGGCTATGGCGCTGTTTTGAGTTGGACCCTGCGCGGCGG
CGGGAGCGGGAGAAGGCCAGTGCAGCCAAAAGCAGCCTCATCCACCAAGGCATCCGCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 0 .80 RPM
bodymap2_adrenal 1 .82 RPM
bodymap2_brain 0 .70 RPM
bodymap2_breast 1 .69 RPM
bodymap2_colon 1 .28 RPM
bodymap2_heart 0 .66 RPM
bodymap2_kidney 2 .90 RPM
bodymap2_liver 0 .06 RPM
bodymap2_lung 1 .72 RPM
bodymap2_lymph_node 3 .82 RPM
bodymap2_ovary 0 .56 RPM
bodymap2_prostate 0 .31 RPM
bodymap2_skeletal_muscle 0 .16 RPM
bodymap2_testis 36 .69 RPM
bodymap2_thyroid 1 .47 RPM
bodymap2_white_blood_cells 0 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006680 ortholog_one2one 2 retrogenes
retro_chof_2172, retro_chof_2286,
Callithrix jacchus ENSCJAG00000003414 ortholog_one2one 1 retrogene
retro_cjac_1608,
Gorilla gorilla ENSGGOG00000010419 ortholog_one2one 1 retrogene
retro_ggor_96,
Mus musculus ENSMUSG00000006398 ortholog_one2one 1 retrogene
retro_mmus_1536,
Nomascus leucogenys ENSNLEG00000013419 ortholog_one2one 1 retrogene
retro_nleu_2847,
Pongo abelii ENSPPYG00000001448 ortholog_one2one 1 retrogene
retro_pabe_3428,
Pan troglodytes ENSPTRG00000000634 ortholog_one2one 1 retrogene
retro_ptro_2843,
Tarsius syrichta ENSTSYG00000012703 ortholog_one2one 3 retrogenes
retro_tsyr_1560, retro_tsyr_442, retro_tsyr_938,
Tursiops truncatus ENSTTRG00000010813 ortholog_one2one 1 retrogene
retro_ttru_1309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4187 93.59 100.00
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Download FASTA sequences of all ENSG00000117399 retrocopies