Parental gene:

SMU1, ENSG00000122692

Aliases:SMU1, BWD, SMU-1, fSAP57
Description:smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) [Source:HGNC Symbol;Acc:18247]
Organism:Human (Homo sapiens)
Coordinates:9:33041761..33076665(-)


>ENSG00000122692
ATGTCGATCGAAATCGAATCTTCGGATGTGATCCGCCTTATTATGCAGTACTTGAAGGAGAACAGTTTACATCGGGCGTT
AGCCACCTTGCAGGAGGAGACTACTGTGTCTCTGAATACTGTGGACAGCATTGAGAGTTTTGTGGCTGACATTAACAGTG
GCCATTGGGATACTGTGTTGCAGGCTATACAGTCTCTGAAATTGCCAGACAAAACCCTCATTGACCTCTATGAACAGGTT
GTTCTGGAATTGATAGAGCTCCGTGAATTGGGTGCTGCCAGGTCACTTTTGAGACAGACTGATCCCATGATCATGTTAAA
ACAAACACAGCCAGAGCGATATATTCATCTGGAGAACCTTTTGGCCAGGTCTTACTTTGATCCTCGTGAGGCATACCCAG
ATGGAAGTAGCAAAGAAAAGAGAAGAGCAGCAATTGCCCAGGCCTTAGCTGGCGAAGTCAGTGTGGTGCCTCCATCTCGT
CTCATGGCATTGCTGGGACAGGCACTGAAGTGGCAGCAGCATCAGGGATTGCTTCCTCCTGGTATGACCATAGATTTGTT
TCGAGGCAAGGCAGCTGTCAAAGATGTGGAAGAAGAAAAGTTTCCTACACAACTGAGCAGGCATATTAAGTTTGGTCAGA
AATCACATGTGGAGTGTGCTCGATTTTCTCCAGATGGTCAGTATTTGGTCACTGGGTCTGTTGATGGATTCATTGAAGTA
TGGAACTTTACTACTGGAAAAATCAGAAAGGATCTTAAGTACCAGGCCCAAGATAACTTTATGATGATGGATGATGCTGT
CCTCTGCATGTGTTTCAGCAGAGATACAGAAATGTTAGCAACTGGGGCCCAAGATGGAAAAATCAAGGTGTGGAAGATTC
AGAGTGGACAATGTTTAAGGAGATTTGAGAGGGCACACAGTAAGGGTGTCACCTGTCTAAGCTTTTCTAAGGATAGCAGT
CAGATCCTTAGTGCTTCTTTTGACCAGACAATTAGAATTCATGGTTTAAAATCTGGGAAAACCCTGAAGGAATTTCGTGG
CCATTCCTCCTTTGTTAACGAAGCAACATTTACACAAGATGGACATTACATTATTAGTGCATCCTCTGATGGCACTGTAA
AGATCTGGAATATGAAGACCACAGAATGTTCAAATACCTTTAAATCCCTGGGCAGCACCGCAGGGACAGATATTACCGTC
AACAGTGTGATTCTACTTCCTAAAAACCCTGAGCACTTTGTGGTGTGCAACAGATCAAACACGGTGGTCATCATGAACAT
GCAGGGGCAGATTGTCAGAAGCTTCAGTTCTGGTAAAAGAGAAGGTGGGGACTTTGTTTGCTGTGCCCTCTCTCCCCGTG
GTGAATGGATCTACTGTGTAGGGGAGGACTTTGTGCTCTACTGTTTCAGTACAGTCACTGGCAAACTGGAGAGAACTTTG
ACAGTGCACGAGAAGGATGTGATTGGTATTGCACATCACCCTCATCAGAACCTGATTGCTACCTACAGTGAAGATGGACT
CCTAAAGCTCTGGAAACCATAA

Library Parental gene expression (RPM)
bodymap2_liver 32 .30 RPM
bodymap2_lung 63 .45 RPM
bodymap2_breast 76 .19 RPM
bodymap2_adipose 78 .00 RPM
bodymap2_adrenal 84 .68 RPM
bodymap2_skeletal_muscle 64 .99 RPM
bodymap2_thyroid 88 .64 RPM
bodymap2_prostate 79 .90 RPM
bodymap2_colon 65 .57 RPM
bodymap2_testis 99 .45 RPM
bodymap2_brain 90 .46 RPM
bodymap2_heart 41 .69 RPM
bodymap2_white_blood_cells 131 .87 RPM
bodymap2_lymph_node 63 .56 RPM
bodymap2_ovary 124 .12 RPM
bodymap2_kidney 66 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000006212 ortholog_one2one 1 retrogene
retro_cpor_819,
Homo sapiens ENSG00000007168 within_species_paralog 2 retrogenes
retro_hsap_2144, retro_hsap_2292,
Homo sapiens ENSG00000196363 other_paralog 1 retrogene
retro_hsap_11,
Gorilla gorilla ENSGGOG00000014802 ortholog_one2one 1 retrogene
retro_ggor_440,
Myotis lucifugus ENSMLUG00000016097 ortholog_one2one 1 retrogene
retro_mluc_213,
Monodelphis domestica ENSMODG00000003439 ortholog_one2one 1 retrogene
retro_mdom_965,
Ochotona princeps ENSOPRG00000011389 ortholog_one2one 2 retrogenes
retro_opri_19, retro_opri_741,
Pongo abelii ENSPPYG00000019140 ortholog_one2one 1 retrogene
retro_pabe_274,
Pan troglodytes ENSPTRG00000020853 ortholog_one2one 1 retrogene
retro_ptro_344,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_457 94.92 99.61
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000122692 retrocopies