Parental gene: | GPCPD1, ENSG00000125772 |
| Aliases: | GPCPD1, GDE5, GDPD6, PREI4 |
| Description: | glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26957] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 20:5525084..5591672(-) |
>ENSG00000125772
ATGACACCTTCTCAGGTTGCCTTTGAAATAAGAGGAACTCTTTTACCAGGAGAAGTTTTTGCGATATGTGGAAGCTGTGA
TGCTTTGGGAAACTGGAATCCTCAAAATGCTGTGGCTCTTCTTCCAGAGAATGACACAGGTGAAAGCATGCTATGGAAAG
CAACCATTGTACTCAGTAGAGGAGTATCAGTTCAGTATCGCTACTTCAAAGGGTACTTTTTAGAACCAAAGACTATCGGT
GGTCCATGTCAAGTGATAGTTCACAAGTGGGAGACTCATCTACAACCACGATCAATAACCCCTTTAGAAAGCGAAATTAT
TATTGACGATGGACAATTTGGAATCCACAATGGTGTTGAAACTCTGGATTCTGGATGGCTGACATGTCAGACTGAAATAA
GATTACGTTTGCATTATTCTGAAAAACCTCCTGTGTCAATAACCAAGAAAAAATTAAAAAAATCTAGATTTAGGGTGAAG
CTGACACTAGAAGGCCTGGAGGAAGATGACGATGATAGGGTATCTCCCACTGTACTCCACAAAATGTCCAATAGCTTGGA
GATATCCTTAATAAGCGACAATGAGTTCAAGTGCAGGCATTCACAGCCGGAGTGTGGTTATGGCTTGCAGCCTGATCGTT
GGACAGAGTACAGCATACAGACGATGGAACCAGATAACCTGGAACTAATCTTTGATTTTTTCGAAGAAGATCTCAGTGAG
CACGTAGTTCAGGGTGATGCCCTTCCTGGACATGTGGGTACAGCTTGTCTCTTATCATCCACCATTGCTGAGAGTGGAAA
GAGTGCTGGAATTCTTACTCTTCCCATCATGAGCAGAAATTCCCGGAAAACAATAGGCAAAGTGAGAGTTGACTATATAA
TTATTAAGCCATTACCAGGATACAGTTGTGACATGAAATCTTCATTTTCCAAGTATTGGAAGCCAAGAATACCATTGGAT
GTTGGCCATCGAGGTGCAGGAAACTCTACAACAACTGCCCAGCTGGCTAAAGTTCAAGAAAATACTATTGCTTCTTTAAG
AAATGCTGCTAGTCATGGTGCAGCCTTTGTAGAATTTGACGTACACCTTTCAAAGGACTTTGTGCCCGTGGTATATCATG
ATCTTACCTGTTGTTTGACTATGAAAAAGAAATTTGATGCTGATCCAGTTGAATTATTTGAAATTCCAGTAAAAGAATTA
ACATTTGACCAACTCCAGTTGTTAAAGCTCACTCATGTGACTGCACTGAAATCTAAGGATCGGAAAGAATCTGTGGTTCA
GGAGGAAAATTCCTTTTCAGAAAATCAGCCATTTCCTTCTCTTAAGATGGTTTTAGAGTCTTTGCCAGAAGATGTAGGGT
TTAACATTGAAATAAAATGGATCTGCCAGCAAAGGGATGGAATGTGGGATGGTAACTTATCAACATATTTTGACATGAAT
CTGTTTTTGGATATAATTTTAAAAACTGTTTTAGAAAATTCTGGGAAGAGGAGAATAGTGTTTTCTTCATTTGATGCAGA
TATTTGCACAATGGTTCGGCAAAAGCAGAACAAATATCCGATACTATTTTTAACTCAAGGAAAATCTGAGATTTATCCTG
AACTCATGGACCTCAGATCTCGGACAACCCCCATTGCAATGAGCTTTGCACAGTTTGAAAATCTACTGGGGATAAATGTA
CATACTGAAGACTTGCTCAGAAACCCATCCTATATTCAAGAGGCAAAAGCTAAGGGACTAGTCATATTCTGCTGGGGTGA
TGATACCAATGATCCTGAAAACAGAAGGAAATTGAAGGAACTTGGAGTTAATGGTCTAATTTATGATAGGATATATGATT
GGATGCCTGAACAACCAAATATATTCCAAGTGGAGCAATTGGAACGCCTGAAGCAGGAATTGCCAGAGCTTAAGAGCTGT
TTGTGTCCCACTGTTAGCCGCTTTGTTCCCTCATCTTTGTGTGGGGAGTCTGATATCCATGTGGATGCCAACGGCATTGA
TAACGTGGAGAATGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 38 .54 RPM |
| bodymap2_adrenal | 78 .81 RPM |
| bodymap2_brain | 47 .82 RPM |
| bodymap2_breast | 59 .44 RPM |
| bodymap2_colon | 26 .78 RPM |
| bodymap2_heart | 16 .45 RPM |
| bodymap2_kidney | 41 .86 RPM |
| bodymap2_liver | 10 .06 RPM |
| bodymap2_lung | 79 .61 RPM |
| bodymap2_lymph_node | 35 .40 RPM |
| bodymap2_ovary | 119 .29 RPM |
| bodymap2_prostate | 68 .22 RPM |
| bodymap2_skeletal_muscle | 36 .12 RPM |
| bodymap2_testis | 35 .48 RPM |
| bodymap2_thyroid | 55 .53 RPM |
| bodymap2_white_blood_cells | 113 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pongo abelii | ENSPPYG00000010687 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013228 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006827 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3854 | 91.81 | 75.89 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000125772 retrocopies