Parental gene:

GNL3L, ENSG00000130119

Aliases:None
Description:guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:HGNC Symbol;Acc:25553]
Organism:Human (Homo sapiens)
Coordinates:X:54556643..54587504(+)


>ENSG00000130119
ATGATGAAACTTAGACACAAAAATAAAAAGCCAGGTGAAGGTTCCAAGGGCCACAAGAAGATAAGTTGGCCCTACCCTCA
GCCTGCAAAGCAAAATGGGAAGAAAGCAACCTCCAAAGTGCCCTCTGCACCTCATTTTGTTCACCCCAATGATCATGCCA
ATCGAGAGGCTGAATTAAAGAAGAAGTGGGTTGAGGAGATGAGGGAGAAGCAGCAAGCCGCCCGGGAGCAAGAAAGACAA
AAACGCAGGACCATTGAGAGCTACTGTCAGGATGTCCTAAGACGCCAGGAGGAGTTTGAGCATAAGGAGGAAGTTTTGCA
GGAATTAAATATGTTTCCTCAGCTGGATGACGAGGCCACGAGGAAGGCTTATTACAAGGAGTTCCGTAAGGTGGTGGAAT
ACTCTGATGTGATTCTGGAAGTCCTGGATGCCAGAGACCCATTAGGCTGCCGCTGCTTCCAAATGGAGGAGGCTGTCCTG
CGAGCACAAGGCAACAAGAAGCTGGTCCTGGTCTTGAACAAGATTGACCTGGTCCCCAAGGAGGTTGTGGAGAAATGGCT
GGATTACCTTCGGAATGAGTTGCCAACCGTGGCTTTCAAGGCCAGTACCCAGCATCAGGTCAAAAACCTGAATCGTTGCA
GTGTGCCAGTAGATCAGGCCTCTGAGTCACTGCTGAAAAGCAAAGCCTGCTTTGGAGCTGAAAACCTCATGAGGGTTCTG
GGGAACTATTGCCGCCTTGGTGAAGTGCGCACCCACATTCGTGTGGGTGTTGTGGGTCTTCCCAATGTTGGGAAGAGCAG
CCTGATCAATAGCCTGAAGCGCAGCCGCGCATGCAGCGTGGGAGCTGTTCCTGGAATTACCAAATTCATGCAGGAGGTCT
ACCTGGACAAGTTCATCCGGCTCTTGGATGCTCCAGGCATTGTCCCAGGGCCCAACTCAGAGGTGGGCACCATCCTGCGT
AACTGCGTCCACGTGCAGAAGCTGGCAGACCCTGTGACCCCAGTGGAGACCATCCTGCAGCGCTGCAACCTGGAGGAGAT
TTCCAACTATTATGGCGTCTCTGGGTTCCAGACCACTGAGCACTTTCTGACGGCAGTGGCCCACCGTTTGGGGAAGAAGA
AGAAGGGAGGCTTATATAGTCAGGAACAGGCGGCCAAAGCTGTCCTAGCTGACTGGGTGAGCGGGAAGATCAGCTTCTAT
ATACCACCACCAGCCACTCACACTCTGCCCACCCATCTCAGTGCTGAGATCGTTAAGGAAATGACCGAGGTCTTTGACAT
CGAGGATACTGAGCAGGCCAATGAAGACACCATGGAATGCTTGGCCACCGGAGAATCTGATGAGCTGTTGGGTGACACGG
ACCCACTTGAAATGGAGATCAAGTTGCTCCATTCTCCGATGACGAAAATAGCAGATGCCATTGAAAATAAAACCACCGTG
TATAAGATTGGAGATCTCACTGGGTATTGCACCAATCCGAACCGTCATCAGATGGGGTGGGCTAAACGCAATGTGGACCA
CCGCCCTAAGAGCAACAGTATGGTGGATGTCTGCTCAGTGGACCGCCGCTCAGTGCTGCAGAGGATCATGGAGACGGACC
CCCTGCAACAGGGCCAGGCTCTGGCATCTGCCCTGAAAAATAAGAAGAAGATGCAGAAACGTGCAGATAAAATCGCCAGC
AAGCTGTCTGATTCCATGATGTCTGCTCTCGACCTCTCTGGCAATGCTGATGATGGTGTTGGTGACTAA

Library Parental gene expression (RPM)
bodymap2_liver 5 .49 RPM
bodymap2_lung 7 .05 RPM
bodymap2_breast 11 .63 RPM
bodymap2_adipose 20 .81 RPM
bodymap2_adrenal 22 .21 RPM
bodymap2_skeletal_muscle 20 .01 RPM
bodymap2_thyroid 22 .45 RPM
bodymap2_prostate 6 .75 RPM
bodymap2_colon 7 .73 RPM
bodymap2_testis 7 .64 RPM
bodymap2_brain 7 .95 RPM
bodymap2_heart 15 .51 RPM
bodymap2_white_blood_cells 30 .16 RPM
bodymap2_lymph_node 10 .91 RPM
bodymap2_ovary 16 .46 RPM
bodymap2_kidney 8 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000000252 ortholog_one2one 2 retrogenes
retro_cjac_1591, retro_cjac_1853,
Gorilla gorilla ENSGGOG00000007550 ortholog_one2one 1 retrogene
retro_ggor_1296,
Microcebus murinus ENSMICG00000010144 ortholog_one2one 1 retrogene
retro_mmur_662,
Macaca mulatta ENSMMUG00000008231 ortholog_one2one 1 retrogene
retro_mmul_2084,
Nomascus leucogenys ENSNLEG00000016233 ortholog_one2one 1 retrogene
retro_nleu_1672,
Oryzias latipes ENSORLG00000014117 ortholog_one2one 1 retrogene
retro_olat_29,
Pongo abelii ENSPPYG00000020383 ortholog_one2one 1 retrogene
retro_pabe_2742,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3327 76.23 62.37
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Download FASTA sequences of all ENSG00000130119 retrocopies