Parental gene: | PPP1R1A, ENSG00000135447 |
| Aliases: | PPP1R1A, I1, IPP1 |
| Description: | protein phosphatase 1, regulatory (inhibitor) subunit 1A [Source:HGNC Symbol;Acc:9286] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:54969170..54982443(-) |
>ENSG00000135447
ATGGAGCAAGACAACAGCCCCCGAAAGATCCAGTTCACGGTCCCGCTGCTGGAGCCGCACCTTGACCCCGAGGCGGCGGA
GCAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACC
GGATCCCCAACCCACATCTCAAGTCCACTTTGGCAATGTCTCCACGGCAACGGAAGAAGATGACAAGGATCACACCCACA
ATGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAAGGAGAGGAACCTGAGGGGGCCGCTGAGAG
CACAGAAACCCAGGAGTCCCGCCCACCTGGGATCCCAGACACAGAAGTGGAGTCAAGGCTGGGCACCTCTGGGACAGCAA
AAAAAACTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATA
CCACCACTGGATTCCAAGGGAGCCAACTCGGTCTGA
ATGGAGCAAGACAACAGCCCCCGAAAGATCCAGTTCACGGTCCCGCTGCTGGAGCCGCACCTTGACCCCGAGGCGGCGGA
GCAGATTCGGAGGCGCCGCCCCACCCCTGCCACCCTCGTGCTGACCAGTGACCAGTCATCCCCAGAGATAGATGAAGACC
GGATCCCCAACCCACATCTCAAGTCCACTTTGGCAATGTCTCCACGGCAACGGAAGAAGATGACAAGGATCACACCCACA
ATGAAAGAGCTCCAGATGATGGTTGAACATCACCTGGGGCAACAGCAGCAAGGAGAGGAACCTGAGGGGGCCGCTGAGAG
CACAGAAACCCAGGAGTCCCGCCCACCTGGGATCCCAGACACAGAAGTGGAGTCAAGGCTGGGCACCTCTGGGACAGCAA
AAAAAACTGCAGAATGCATCCCTAAAACTCACGAGAGAGGCAGTAAGGAACCCAGCACAAAAGAACCCTCAACCCATATA
CCACCACTGGATTCCAAGGGAGCCAACTCGGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 94 .36 RPM |
| bodymap2_lung | 1 .65 RPM |
| bodymap2_breast | 272 .05 RPM |
| bodymap2_adipose | 369 .09 RPM |
| bodymap2_adrenal | 2 .15 RPM |
| bodymap2_skeletal_muscle | 274 .89 RPM |
| bodymap2_thyroid | 26 .48 RPM |
| bodymap2_prostate | 27 .19 RPM |
| bodymap2_colon | 29 .93 RPM |
| bodymap2_testis | 6 .50 RPM |
| bodymap2_brain | 22 .74 RPM |
| bodymap2_heart | 65 .04 RPM |
| bodymap2_white_blood_cells | 0 .00 RPM |
| bodymap2_lymph_node | 9 .89 RPM |
| bodymap2_ovary | 5 .47 RPM |
| bodymap2_kidney | 243 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000010159 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008380 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004608 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005044 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000001193 | ortholog_one2one | 20 retrogenes |
retro_tbel_1191, retro_tbel_1233, retro_tbel_1251, retro_tbel_1264, retro_tbel_138, retro_tbel_1881, retro_tbel_2036, retro_tbel_2437, retro_tbel_2574, retro_tbel_2720, retro_tbel_3243, retro_tbel_3316, retro_tbel_3377, retro_tbel_3380, retro_tbel_3414, retro_tbel_3426, retro_tbel_4551, retro_tbel_537, retro_tbel_669, retro_tbel_899,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_896 | 68.70 | 67.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1633 | 56.15 | 74.27 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000135447 retrocopies