Parental gene:

SLC19A3, ENSG00000135917

Aliases:SLC19A3, BBGD, THMD2, THTR2
Description:solute carrier family 19, member 3 [Source:HGNC Symbol;Acc:16266]
Organism:Human (Homo sapiens)
Coordinates:2:228549925..228582728(-)


>ENSG00000135917
ATGGATTGTTACAGAACTTCACTAAGCAGTTCCTGGATTTACCCCACTGTGATCCTCTGCTTATTTGGTTTTTTCTCCAT
GATGAGACCCTCAGAACCATTCCTTATCCCATATTTATCTGGACCAGATAAAAACCTGACCAGTGCAGAGATAACAAATG
AGATCTTCCCCGTTTGGACATACTCCTACCTGGTGCTGCTGCTGCCTGTGTTTGTCCTCACCGATTATGTCCGCTACAAG
CCAGTCATCATCTTGCAAGGTATCAGTTTCATCATTACCTGGCTGCTGCTGTTGTTTGGCCAAGGAGTGAAGACCATGCA
GGTTGTAGAGTTCTTCTATGGGATGGTCACCGCCGCCGAGGTGGCCTACTACGCCTACATATACAGCGTGGTCAGCCCCG
AGCACTACCAGAGAGTGAGCGGCTACTGCAGGAGCGTCACGCTGGCCGCCTACACAGCAGGGTCGGTGCTGGCTCAACTC
TTGGTATCCCTGGCGAACATGTCGTACTTTTACCTCAACGTCATATCCTTGGCCTCTGTCTCCGTGGCTTTCCTTTTCTC
ACTTTTCCTACCAATGCCCAAGAAAAGCATGTTTTTTCATGCAAAACCCAGCAGAGAAATAAAGAAGTCATCAAGCGTGA
ATCCAGTATTAGAGGAAACTCACGAAGGTGAAGCACCAGGCTGTGAAGAGCAGAAACCCACATCAGAAATACTCAGCACT
TCAGGGAAGCTGAATAAGGGCCAGCTGAACAGCCTGAAACCAAGCAATGTGACTGTGGACGTTTTTGTGCAGTGGTTCCA
AGATTTGAAGGAGTGCTACTCCTCAAAACGTCTTTTCTACTGGTCTCTATGGTGGGCTTTCGCCACAGCAGGTTTTAACC
AGGTTTTGAACTATGTTCAAATCCTGTGGGATTACAAGGCGCCATCCCAAGATTCTTCCATCTATAATGGGGCCGTAGAA
GCTATTGCAACCTTTGGAGGGGCTGTGGCTGCCTTTGCAGTGGGTTATGTGAAAGTCAACTGGGACCTTCTGGGAGAGCT
GGCTCTGGTGGTCTTCTCAGTTGTCAATGCCGGTTCTTTATTTCTCATGCATTACACAGCCAATATCTGGGCGTGCTATG
CTGGCTATTTGATATTCAAGTCCAGCTATATGCTTCTTATAACCATAGCAGTATTTCAGATTGCAGTTAATCTGAATGTG
GAACGCTATGCCTTGGTATTTGGAATCAACACCTTTATTGCCTTGGTGATTCAGACCATCATGACTGTGATTGTAGTAGA
TCAGAGAGGGCTCAACTTGCCAGTCAGCATTCAGTTTTTAGTTTATGGGAGCTATTTTGCAGTAATTGCTGGAATTTTCC
TAATGAGAAGCATGTATATTACCTACTCAACCAAATCCCAGAAGGATGTACAGAGCCCTGCTCCAAGTGAGAATCCAGAT
GTGTCTCACCCAGAGGAAGAGAGTAATATCATCATGTCAACAAAACTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 9 .61 RPM
bodymap2_lung 18 .27 RPM
bodymap2_breast 252 .30 RPM
bodymap2_adipose 318 .76 RPM
bodymap2_adrenal 15 .17 RPM
bodymap2_skeletal_muscle 0 .85 RPM
bodymap2_thyroid 1 .96 RPM
bodymap2_prostate 5 .13 RPM
bodymap2_colon 9 .47 RPM
bodymap2_testis 1 .81 RPM
bodymap2_brain 3 .33 RPM
bodymap2_heart 3 .06 RPM
bodymap2_white_blood_cells 0 .00 RPM
bodymap2_lymph_node 22 .55 RPM
bodymap2_ovary 2 .93 RPM
bodymap2_kidney 11 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000004344 ortholog_one2one 1 retrogene
retro_ggor_2518,
Monodelphis domestica ENSMODG00000021220 ortholog_one2many 1 retrogene
retro_mdom_955,
Mustela putorius furo ENSMPUG00000001374 ortholog_one2one 1 retrogene
retro_mputfur_1211,
Nomascus leucogenys ENSNLEG00000013501 ortholog_one2one 1 retrogene
retro_nleu_2561,
Pongo abelii ENSPPYG00000013242 ortholog_one2one 1 retrogene
retro_pabe_3209,
Pan troglodytes ENSPTRG00000028998 ortholog_one2one 1 retrogene
retro_ptro_2526,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3732 57.75 73.58
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Download FASTA sequences of all ENSG00000135917 retrocopies