Parental gene:

SLC19A3, ENSPPYG00000013242

Aliases:None
Description:solute carrier family 19, member 3 [Source:HGNC Symbol;Acc:16266]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:119863362..119882865(-)


>ENSPPYG00000013242
ATGATTTGGAACGCACAGAAAATGAAGGGGAAAAGTAAACATCTGGCTTTCACAGCCATGGATTGTTACAGAAATTCACT
AAGCAGTTCCTGGATTTACCCCACTGTGATCCTCTGCTTATTTGGTTTTTTCTCCATGATGAGACCCTCAGAACCATTCC
TTATCCCATATTTATCTGGACCAGATAAAAACCTGACCAGTGCAGAGATAACAAATGAGATCTTCCCCGTTTGGACATAC
TCCTACCTAGTGCTGCTGCTGCCTGTGTTTGTCCTCACCGATTATGTCCGCTACAAGCCAGTCATCATCTTGCAAGGTAT
CAGTTTCATCATTACCTGGCTGCTGCTGTTGTTTGGCCAAGGAGTGAAGACCATGCAGGTTGTAGAGTTCTTCTATGGGA
TGGTCACCGCCGCCGAGGTGGCCTACTACGCCTACATATACAGCGTGGTCAGCCCCGAGCACTACCAGAGAGTGAGCGGC
TACTGCAGGAGCGTCACGCTGGCCGCCTACACAGCAGGGTCCGTGCTGGCTCAACTCTTGGTATCCCTGGCGAACCTGTC
GTACTTTTACCTCCATGTCATATCCTTGGCCTCTGTCTCCGTGGCCTTCCTTTTCTCACTTTTCCTACCAATGCCCAAGA
AAAGCATGTTTTTTCATGCAAAACCCAGCAGAGAAATAAAGAAGTCATCAAGCGTGAAGCCAGTATTAGAGGAAACTCAC
GGAGGTGAAGCACCAGGCTGTGAAGAGCAGAAACCCACATCAGAAATACTCAGCACTTCAGGGAAGCCGAATAAGGGCCA
GCTGAACAGCCTGAAACCAAGCAGTGTGACTGTGGAAGTTTTTGTGCAGTGGTTCCAAGATCTGAAGGAGTGCTACTCCT
CAAAACGTCTTTTCTACTGGTCTCTATGGTGGGCTTTCGCCACAGCAGGTTTTAACCAGGTTTTGAACTATGTTCAAATC
CTGTGGGATTACAAGGCGCCATCCCAAGATTCTTCCATCTATAATGGGGCCGTAGAAGCTATTGCAACCTTTGGAGGGGC
TGTGGCTGCTTTTGCAGTGGGTTATGTGAAAGTCAACTGGGACCTTCTGGGAGAGCTGGCTCTGGCGGTCTTCTCAGTTG
TCAATGCCGGTTCTTTATTTCTCATGCATTACACAGCCAATATCTGGGCGTGCTATGCTGGTTATTTGATATTCAAGTCC
AGCTATATGCTTCTTATAACCATAGCAGTATTTCAGATTGCAGTTAATCTGAATGTGGAACGCTATGCCCTGGTATTTGG
AATCAACACCTTTATTGCCTTGGTGATTCAGACCATCATGACTGTGATTGTAGTAGATCAGAGAGGGCTCAACTTGCCAG
TCAGCATTCAGTTTTTAGTTTATGGGAGCTATTTTGCAGTAATTGCTGGAATTTTCCTAATGAGAAGCATGTATATTATC
TACTCAACCAAATCCCAGAAGGATGTACAGAGCCCTGCTCCAAGTGAGAATCCAGATGTGTCTCACCCAGAGGAAGAGAG
TAATATCATCATGTCAACAAAACTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .94 RPM
SRP007412_cerebellum 2 .07 RPM
SRP007412_heart 0 .36 RPM
SRP007412_kidney 0 .76 RPM
SRP007412_liver 6 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000135917 ortholog_one2one 1 retrogene
retro_hsap_3732,
Gorilla gorilla ENSGGOG00000004344 ortholog_one2one 1 retrogene
retro_ggor_2518,
Monodelphis domestica ENSMODG00000021220 ortholog_one2many 1 retrogene
retro_mdom_955,
Mustela putorius furo ENSMPUG00000001374 ortholog_one2one 1 retrogene
retro_mputfur_1211,
Nomascus leucogenys ENSNLEG00000013501 ortholog_one2one 1 retrogene
retro_nleu_2561,
Pan troglodytes ENSPTRG00000028998 ortholog_one2one 1 retrogene
retro_ptro_2526,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3209 55.05 82.33
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Download FASTA sequences of all ENSPPYG00000013242 retrocopies