Parental gene:

PNPT1, ENSG00000138035

Aliases:PNPT1, COXPD13, DFNB70, OLD35, PNPASE, old-35
Description:polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:23166]
Organism:Human (Homo sapiens)
Coordinates:2:55861399..55921045(-)


>ENSG00000138035
ATGGCGGCCTGCAGGTACTGCTGCTCGTGCCTCCGGCTCCGGCCCCTGAGCGATGGTCCTTTCCTTCTGCCACGGCGGGA
TCGGGCACTCACCCAGTTGCAAGTGCGAGCACTATGGAGTAGCGCAGGGTCTCGAGCTGTGGCCGTGGACTTAGGCAACA
GGAAATTAGAAATATCTTCTGGAAAGCTGGCCAGATTTGCAGATGGCTCTGCTGTAGTACAGTCAGGTGACACTGCAGTA
ATGGTCACAGCGGTCAGTAAAACAAAACCTTCCCCTTCCCAGTTTATGCCTTTGGTGGTTGACTACAGACAAAAAGCTGC
TGCAGCAGGTAGAATTCCCACAAACTATCTGAGAAGAGAGATTGGTACTTCTGATAAAGAAATTCTAACAAGTCGAATAA
TAGATCGTTCAATTAGACCGCTCTTTCCAGCTGGCTACTTCTATGATACACAGGTTCTGTGTAATCTGTTAGCAGTAGAT
GGTGTAAATGAGCCTGATGTCCTAGCAATTAATGGCGCTTCCGTAGCCCTCTCATTATCAGATATTCCTTGGAATGGACC
TGTTGGGGCAGTACGAATAGGAATAATTGATGGAGAATATGTTGTTAACCCAACAAGAAAAGAAATGTCTTCTAGTACTT
TAAATTTAGTGGTTGCTGGAGCACCTAAAAGTCAGATTGTCATGTTGGAAGCCTCTGCAGAGAACATTTTACAGCAGGAC
TTTTGCCATGCTATCAAAGTGGGAGTGAAATATACCCAACAAATAATTCAGGGCATTCAGCAGTTGGTAAAAGAAACTGG
TGTTACCAAGAGGACACCTCAGAAGTTATTTACCCCTTCGCCAGAGATTGTGAAATATACTCATAAACTTGCTATGGAGA
GACTCTATGCAGTTTTTACAGATTACGAGCATGACAAAGTTTCCAGAGATGAAGCTGTTAACAAAATAAGATTAGATACG
GAGGAACAACTAAAAGAAAAATTTCCAGAAGCCGATCCATATGAAATAATAGAATCCTTCAATGTTGTTGCAAAGGAAGT
TTTTAGAAGTATTGTTTTGAATGAATACAAAAGGTGCGATGGTCGGGATTTGACTTCACTTAGGAATGTAAGTTGTGAGG
TAGATATGTTTAAAACCCTTCATGGATCAGCATTATTTCAAAGAGGACAAACACAGGTGCTTTGTACCGTTACATTTGAT
TCATTAGAATCTGGTATTAAGTCAGATCAAGTTATAACAGCTATAAATGGGATAAAAGATAAAAATTTCATGCTGCACTA
CGAGTTTCCTCCTTATGCAACTAATGAAATTGGCAAAGTCACTGGTTTAAATAGAAGAGAACTTGGGCATGGTGCTCTTG
CTGAGAAAGCTTTGTATCCTGTTATTCCCCGAGATTTTCCTTTCACCATAAGAGTTACATCTGAAGTCCTAGAGTCAAAT
GGGTCATCTTCTATGGCATCTGCATGTGGCGGAAGTTTAGCATTAATGGATTCAGGGGTTCCAATTTCATCTGCTGTTGC
AGGCGTAGCAATAGGATTGGTCACCAAAACCGATCCTGAGAAGGGTGAAATAGAAGATTATCGTTTGCTGACAGATATTT
TGGGAATTGAAGATTACAATGGTGACATGGACTTCAAAATAGCTGGCACTAATAAAGGAATAACTGCATTACAGGCTGAT
ATTAAATTACCTGGAATACCAATAAAAATTGTGATGGAGGCTATTCAACAAGCTTCAGTGGCAAAAAAGGAGATATTACA
GATCATGAACAAAACTATTTCAAAACCTCGAGCATCTAGAAAAGAAAATGGACCTGTTGTAGAAACTGTTCAGGTTCCAT
TATCAAAACGAGCAAAATTTGTTGGACCTGGTGGCTATAACTTAAAAAAACTTCAGGCTGAAACAGGTGTAACTATTAGT
CAGGTGGATGAAGAAACGTTTTCTGTATTTGCACCAACACCCAGTGCTATGCATGAGGCAAGAGACTTCATTACTGAAAT
CTGCAAGGATGATCAGGAGCAGCAATTAGAATTTGGAGCAGTATATACCGCCACAATAACTGAAATCAGAGATACTGGTG
TAATGGTAAAATTATATCCAAATATGACTGCGGTACTGCTTCATAACACACAACTTGATCAACGAAAGATTAAACATCCT
ACTGCCCTAGGATTAGAAGTTGGCCAAGAAATTCAGGTGAAATACTTTGGACGTGACCCAGCCGATGGAAGAATGAGGCT
TTCTCGAAAAGTGCTTCAGTCGCCAGCTACAACCGTGGTCAGAACTTTGAATGACAGAAGTAGTATTGTAATGGGAGAAC
CTATTTCACAGTCATCATCTAATTCTCAGTGA

Library Parental gene expression (RPM)
bodymap2_liver 21 .99 RPM
bodymap2_lung 17 .90 RPM
bodymap2_breast 25 .51 RPM
bodymap2_adipose 19 .52 RPM
bodymap2_adrenal 45 .89 RPM
bodymap2_skeletal_muscle 25 .52 RPM
bodymap2_thyroid 48 .28 RPM
bodymap2_prostate 20 .94 RPM
bodymap2_colon 14 .31 RPM
bodymap2_testis 31 .43 RPM
bodymap2_brain 30 .12 RPM
bodymap2_heart 24 .79 RPM
bodymap2_white_blood_cells 20 .50 RPM
bodymap2_lymph_node 22 .92 RPM
bodymap2_ovary 37 .69 RPM
bodymap2_kidney 30 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000006867 ortholog_one2one 1 retrogene
retro_ggor_1912,
Pongo abelii ENSPPYG00000012399 ortholog_one2one 1 retrogene
retro_pabe_2220,
Pan troglodytes ENSPTRG00000011934 ortholog_one2one 1 retrogene
retro_ptro_1857,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2749 87.61 98.60
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Download FASTA sequences of all ENSG00000138035 retrocopies