Parental gene:

YTHDF1, ENSG00000149658

Aliases:YTHDF1, C20orf21
Description:YTH domain family, member 1 [Source:HGNC Symbol;Acc:15867]
Organism:Human (Homo sapiens)
Coordinates:20:61826780..61847586(-)


>ENSG00000149658
ATGTCGGCCACCAGCGTGGACACCCAGAGAACAAAAGGACAAGATAATAAAGTACAAAATGGTTCGTTACATCAGAAGGA
TACAGTTCATGACAATGACTTTGAGCCCTACCTTACTGGACAGTCAAATCAGAGTAACAGTTACCCCTCAATGAGCGACC
CCTACCTGTCCAGCTATTACCCGCCGTCCATTGGATTTCCTTACTCCCTCAATGAGGCTCCGTGGTCTACTGCAGGGGAC
CCTCCGATTCCATACCTCACCACCTACGGACAGCTCAGTAACGGAGACCATCATTTTATGCACGATGCTGTTTTTGGGCA
GCCTGGGGGCCTGGGGAACAACATCTATCAGCACAGGTTCAATTTTTTCCCTGAAAACCCTGCGTTCTCAGCATGGGGGA
CAAGTGGGTCTCAAGGTCAGCAGACCCAGAGCTCCGCGTATGGGAGCAGCTACACCTACCCCCCGAGCTCCCTGGGTGGC
ACGGTGGTTGATGGGCAGCCAGGCTTTCACAGCGACACCCTCAGCAAGGCCCCCGGGATGAACAGCCTGGAGCAGGGCAT
GGTTGGCCTGAAGATTGGGGACGTCAGCTCCTCCGCCGTCAAGACGGTGGGCTCTGTCGTCAGCAGCGTGGCACTGACTG
GTGTCCTTTCTGGCAACGGTGGGACAAATGTGAACATGCCAGTTTCAAAGCCGACCTCGTGGGCTGCCATTGCCAGCAAG
CCTGCAAAACCACAGCCTAAAATGAAAACAAAGAGCGGGCCTGTCATGGGGGGTGGGCTGCCCCCTCCACCCATAAAGCA
TAACATGGACATTGGCACCTGGGATAACAAGGGGCCTGTGCCGAAGGCCCCAGTCCCCCAGCAGGCACCCTCTCCACAGG
CTGCCCCACAGCCCCAGCAGGTGGCTCAGCCTCTCCCAGCACAGCCCCCAGCTTTGGCTCAACCGCAGTATCAGAGCCCT
CAGCAGCCACCCCAGACCCGCTGGGTTGCCCCACGCAACAGAAACGCGGCGTTTGGGCAGAGCGGAGGGGCTGGCAGCGA
TAGCAACTCTCCTGGAAACGTCCAGCCTAATTCTGCCCCCAGCGTCGAATCCCACCCCGTCCTTGAAAAACTGAAGGCTG
CTCACAGCTACAACCCGAAAGAGTTTGAGTGGAATCTGAAAAGCGGGCGTGTGTTCATCATCAAGAGCTACTCTGAGGAC
GACATCCACCGCTCCATTAAGTACTCCATCTGGTGTAGCACAGAGCACGGCAACAAGCGCCTGGACAGCGCCTTCCGCTG
CATGAGCAGCAAGGGGCCCGTCTACCTGCTCTTCAGCGTCAATGGGAGTGGGCATTTTTGTGGGGTGGCCGAGATGAAGT
CCCCCGTGGACTACGGCACCAGTGCCGGGGTCTGGTCTCAGGACAAGTGGAAGGGGAAGTTTGATGTCCAGTGGATTTTT
GTTAAGGATGTACCCAATAACCAGCTCCGGCACATCAGGCTGGAGAATAACGACAACAAACCGGTCACAAACTCCCGGGA
CACCCAGGAGGTGCCCTTAGAAAAAGCCAAGCAAGTGCTGAAAATTATCAGTTCCTACAAGCACACAACCTCCATCTTCG
ACGACTTTGCTCACTACGAGAAGCGCCAGGAGGAGGAGGAGGTGGTGCGCAAGGAACGGCAGAGTCGAAACAAACAATGA

Library Parental gene expression (RPM)
bodymap2_liver 36 .23 RPM
bodymap2_lung 56 .65 RPM
bodymap2_breast 57 .28 RPM
bodymap2_adipose 61 .96 RPM
bodymap2_adrenal 80 .90 RPM
bodymap2_skeletal_muscle 66 .15 RPM
bodymap2_thyroid 80 .39 RPM
bodymap2_prostate 42 .71 RPM
bodymap2_colon 37 .45 RPM
bodymap2_testis 77 .86 RPM
bodymap2_brain 87 .34 RPM
bodymap2_heart 30 .24 RPM
bodymap2_white_blood_cells 65 .60 RPM
bodymap2_lymph_node 64 .56 RPM
bodymap2_ovary 72 .92 RPM
bodymap2_kidney 54 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000008340 ortholog_one2one 1 retrogene
retro_ggor_2186,
Nomascus leucogenys ENSNLEG00000009975 ortholog_one2one 1 retrogene
retro_nleu_2724,
Pan troglodytes ENSPTRG00000013730 ortholog_one2one 1 retrogene
retro_ptro_2170,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3220 72.58 63.86
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000149658 retrocopies