Parental gene: | YTHDF1, ENSPTRG00000013730 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 20:60574965..60596011(-) |
>ENSPTRG00000013730
ATGTCGGCCACCAGCGTGGACACCCAGAGAACAAAAGGACAAGATAATAAAGTACAAAATGGTTCTTTACATCAGAAGGA
TACAGTTCATGACAATGACTTTGAGCCCTACCTTACTGGACAGTCAAATCAGAGTAACAGTTACCCCTCAATGAGCGACC
CCTACCTGTCCAGCTATTACCCGCCGTCCATTGGATTTCCTTACTCCCTCAATGAGGCTCCGTGGTCTACTGCAGGGGAC
CCTCCGATTCCATACCTCACCACCTACGGACAGCTCAGTAACGGAGACCATCATTTTATGCACGATGCTGTTTTTGGGCA
GCCTGGGGGCCTGGGGAACAACATCTATCAGCACAGGTTCAATTTTTTCCCTGAAAACCCTGCGTTCTCAGCATGGGGGA
CAAGTGGGTCTCAAGGTCAGCAGACCCAGAGCTCCGCGTATGGGAGCAGCTACACCTACCCCCCGAGCTCCCTGGGTGGC
ACGGTGGTTGATGGGCAGCCAGGCTTTCACAGCGACACCCTCAGCAAGGCCCCCGGGATGAACAGCCTGGAGCAGGGCAT
GGTTGGCCTGAAGATTGGGGACGTCAGCTCCTCCGCTGTCAAGACGGTGGGCTCCGTCGTCAGCAGCGTGGCACTGACTG
GTGTCCTTTCTGGCAACGGTGGGACAAATGTGAACATGCCAGTTTCAAAGCCGACCTCGTGGGCTGCCATTGCCAGCAAG
CCTGCAAAACCACAGCCTAAAATGAAAACAAAGAGCGGGCCTGTCATGGGGGGTGCGCTGCCCCCTCCACCCATAAAGCA
TAACATGGACATTGGCACCTGGGATAACAAGGGGCCTGTGCCGAAGGCCCCAGTCCCCCAGCAGGCACCCTCTCCACAGG
CTGCCCCACAGCCCCAGCAGGTGGCTCAGCCTCTCCCAGCACAGCCCCCAGCTTTGGCTCAACCGCAGTATCAGAGCCCT
CAGCAGCCACCCCAGACCCGCTGGGTTGCCCCACGCAACAGAAACGCGGCGTTTGGGCAGAGCGGAGGGGCTGGCAGCGA
TAGCAACTCTCCTGGAAACGTCCAGCCTAATTCTGCCCCCAGCGTCGAATCCCACCCCGTCCTTGAAAAACTGAAGGCTG
CTCACAGCTACAACCCGAAAGAGTTTGAGTGGAATCTGAAAAGCGGGCGTGTGTTCATCATCAAGAGCTACTCTGAGGAC
GACATCCACCGCTCCATTAAGTACTCCATCTGGTGTAGCACAGAGCACGGCAACAAGCGCCTGGACAGCGCCTTCCGCTG
CATGAGCAGCAAGGGGCCCGTCTACCTGCTCTTCAGCGTCAATGGGAGTGGGCATTTTTGTGGGGTGGCCGAGATGAAGT
CCCCCGTGGACTACGGCACCAGTGCCGGGGTCTGGTCTCAGGACAAGTGGAAGGGGAAGTTTGACGTCCAGTGGATTTTT
GTTAAGGATGTACCCAATAACCAGCTCCGGCACATCAGGCTGGAGAATAACGACAACAAACCGGTCACAAACTCCCGGGA
CACCCAGGAGGTGCCCTTAGAAAAAGCCAAGCAAGTGCTGAAAATTATCAGTTCCTACAAGCACACAACCTCCATCTTCG
ACGACTTTGCTCACTACGAGAAGCGCCAGGAGGAGGAGGAGGTGGTGCGCAAGGAACGGCAGAATCGAAACAAACAATAA
ATGTCGGCCACCAGCGTGGACACCCAGAGAACAAAAGGACAAGATAATAAAGTACAAAATGGTTCTTTACATCAGAAGGA
TACAGTTCATGACAATGACTTTGAGCCCTACCTTACTGGACAGTCAAATCAGAGTAACAGTTACCCCTCAATGAGCGACC
CCTACCTGTCCAGCTATTACCCGCCGTCCATTGGATTTCCTTACTCCCTCAATGAGGCTCCGTGGTCTACTGCAGGGGAC
CCTCCGATTCCATACCTCACCACCTACGGACAGCTCAGTAACGGAGACCATCATTTTATGCACGATGCTGTTTTTGGGCA
GCCTGGGGGCCTGGGGAACAACATCTATCAGCACAGGTTCAATTTTTTCCCTGAAAACCCTGCGTTCTCAGCATGGGGGA
CAAGTGGGTCTCAAGGTCAGCAGACCCAGAGCTCCGCGTATGGGAGCAGCTACACCTACCCCCCGAGCTCCCTGGGTGGC
ACGGTGGTTGATGGGCAGCCAGGCTTTCACAGCGACACCCTCAGCAAGGCCCCCGGGATGAACAGCCTGGAGCAGGGCAT
GGTTGGCCTGAAGATTGGGGACGTCAGCTCCTCCGCTGTCAAGACGGTGGGCTCCGTCGTCAGCAGCGTGGCACTGACTG
GTGTCCTTTCTGGCAACGGTGGGACAAATGTGAACATGCCAGTTTCAAAGCCGACCTCGTGGGCTGCCATTGCCAGCAAG
CCTGCAAAACCACAGCCTAAAATGAAAACAAAGAGCGGGCCTGTCATGGGGGGTGCGCTGCCCCCTCCACCCATAAAGCA
TAACATGGACATTGGCACCTGGGATAACAAGGGGCCTGTGCCGAAGGCCCCAGTCCCCCAGCAGGCACCCTCTCCACAGG
CTGCCCCACAGCCCCAGCAGGTGGCTCAGCCTCTCCCAGCACAGCCCCCAGCTTTGGCTCAACCGCAGTATCAGAGCCCT
CAGCAGCCACCCCAGACCCGCTGGGTTGCCCCACGCAACAGAAACGCGGCGTTTGGGCAGAGCGGAGGGGCTGGCAGCGA
TAGCAACTCTCCTGGAAACGTCCAGCCTAATTCTGCCCCCAGCGTCGAATCCCACCCCGTCCTTGAAAAACTGAAGGCTG
CTCACAGCTACAACCCGAAAGAGTTTGAGTGGAATCTGAAAAGCGGGCGTGTGTTCATCATCAAGAGCTACTCTGAGGAC
GACATCCACCGCTCCATTAAGTACTCCATCTGGTGTAGCACAGAGCACGGCAACAAGCGCCTGGACAGCGCCTTCCGCTG
CATGAGCAGCAAGGGGCCCGTCTACCTGCTCTTCAGCGTCAATGGGAGTGGGCATTTTTGTGGGGTGGCCGAGATGAAGT
CCCCCGTGGACTACGGCACCAGTGCCGGGGTCTGGTCTCAGGACAAGTGGAAGGGGAAGTTTGACGTCCAGTGGATTTTT
GTTAAGGATGTACCCAATAACCAGCTCCGGCACATCAGGCTGGAGAATAACGACAACAAACCGGTCACAAACTCCCGGGA
CACCCAGGAGGTGCCCTTAGAAAAAGCCAAGCAAGTGCTGAAAATTATCAGTTCCTACAAGCACACAACCTCCATCTTCG
ACGACTTTGCTCACTACGAGAAGCGCCAGGAGGAGGAGGAGGTGGTGCGCAAGGAACGGCAGAATCGAAACAAACAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 41 .95 RPM |
| SRP007412_cerebellum | 67 .75 RPM |
| SRP007412_heart | 23 .46 RPM |
| SRP007412_kidney | 46 .65 RPM |
| SRP007412_liver | 44 .52 RPM |
| SRP007412_testis | 33 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000149658 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008340 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009975 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2170 | 69.95 | 99.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000013730 retrocopies