Parental gene:

LARP4, ENSG00000161813

Aliases:None
Description:La ribonucleoprotein domain family, member 4 [Source:HGNC Symbol;Acc:24320]
Organism:Human (Homo sapiens)
Coordinates:12:50786165..50873787(+)


>ENSG00000161813
ATGTTGCTTTTCGTGGAGCAGGTAGCATCTAAAGGAACTGGTTTAAATCCTAATGCCAAAGTATGGCAAGAAATTGCTCC
TGGAAATACTGATGCCACCCCAGTAACTCATGGAACTGAAAGCTCTTGGCATGAAATAGCAGCTACATCAGGTGCTCATC
CTGAGGGTAATGCAGAGCTCTCAGAAGATATATGTAAAGAATATGAAGTAATGTATTCTTCATCTTGTGAAACCACAAGA
AATACTACAGGCATTGAAGAATCAACTGATGGGATGATTTTAGGACCAGAAGATCTGAGTTACCAAATATATGATGTTTC
CGGAGAAAGCAATTCAGCAGTTTCTACAGAAGACCTAAAAGAATGTCTGAAGAAACAATTAGAATTCTGTTTTTCACGAG
AAAATTTGTCAAAGGATCTTTACTTGATATCTCAAATGGATAGTGATCAGTTCATCCCAATTTGGACAGTTGCCAACATG
GAAGAAATAAAAAAGTTGACTACAGACCCTGATCTAATTCTTGAAGTGTTAAGATCTTCTCCCATGGTACAAGTTGATGA
GAAGGGTGAGAAAGTGAGACCAAGTCATAAGCGTTGTATTGTAATTCTTAGAGAGATTCCTGAAACAACACCAATAGAGG
AAGTGAAAGGTTTGTTCAAAAGTGAAAACTGCCCCAAAGTGATAAGCTGTGAGTTTGCACACAATAGCAACTGGTATATC
ACTTTCCAGTCAGACACAGATGCACAACAGGCTTTTAAATACTTAAGAGAAGAAGTTAAAACATTTCAGGGCAAGCCAAT
TATGGCAAGGATAAAAGCCATCAATACATTTTTTGCTAAGAATGGTTATCGATTAATGGATTCTAGTATCTATAGTCACC
CCATTCAAACTCAAGCACAGTATGCCTCCCCAGTCTTTATGCAGCCTGTATATAATCCTCACCAACAGTACTCGGTCTAT
AGTATTGTGCCTCAGTCTTGGTCTCCAAATCCTACACCTTACTTTGAAACACCACTGGCTCCCTTTCCCAATGGTAGTTT
TGTGAATGGCTTTAATTCGCCAGGATCTTATAAAACAAATGCTGCTGCTATGAATATGGGTCGACCATTCCAAAAAAATC
GTGTGAAGCCTCAGTTTAGGTCATCTGGTGGTTCAGAACACTCAACAGAGGGCTCTGTATCCTTGGGGGATGGACAGTTG
AACAGATATAGTTCAAGAAACTTTCCAGCTGAACGGCATAACCCCACAGTAACTGGGCATCAGGAGCAAACTTACCTTCA
GAAGGAGACTTCCACTTTGCAGGTGGAACAGAATGGGGACTATGGTAGGGGCAGGAGAACTCTCTTCAGAGGTCGAAGAC
GACGAGAAGATGACAGGATCTCAAGACCTCATCCTTCAACAGCTGAATCAAAGGCTCCAACACCAAAGTTTGACTTATTA
GCCTCAAATTTTCCACCTTTACCTGGAAGTTCATCAAGAATGCCAGGTGAACTCGTTTTGGAGAATAGGATGTCTGATGT
TGTTAAAGGTGTCTACAAAGAAAAGGATAATGAAGAGTTGACAATTAGTTGCCCAGTGCCTGCAGATGAGCAGACAGAAT
GCACTTCTGCCCAGCAACTCAATATGAGTACCAGTTCTCCATGTGCTGCTGAGCTTACTGCATTAAGCACAACTCAGCAA
GAAAAGGATCTAATAGAAGATTCCTCTGTTCAGAAGGATGGTCTCAATCAGACAACTATACCAGTTTCTCCTCCAAGTAC
TACAAAGCCATCGAGGGCAAGTACTGCTTCACCATGTAATAATAACATAAATGCAGCTACAGCTGTGGCTCTACAGGAAC
CCCGAAAGTTAAGTTATGCTGAAGTGTGCCAGAAGCCCCCTAAAGAGCCATCTTCAGTTCTTGTGCAGCCACTACGGGAA
CTTCGCTCCAATGTGGTGTCTCCCACCAAAAATGAAGACAATGGAGCTCCTGAGAACTCCGTTGAGAAACCACATGAGAA
GCCAGAAGCAAGGGCTAGTAAGGATTATTCTGGCTTCCGAGGCAATATAATCCCCAGGGGAGCAGCAGGAAAAATCAGGG
AACAGAGACGCCAGTTTAGCCATAGGGCTATACCTCAGGGAGTGACTCGACGTAATGGCAAAGAGCAATATGTGCCACCC
AGATCACCAAAGTAA

Library Parental gene expression (RPM)
bodymap2_liver 98 .84 RPM
bodymap2_lung 77 .81 RPM
bodymap2_breast 53 .37 RPM
bodymap2_adipose 61 .14 RPM
bodymap2_adrenal 47 .45 RPM
bodymap2_skeletal_muscle 59 .38 RPM
bodymap2_thyroid 91 .11 RPM
bodymap2_prostate 63 .06 RPM
bodymap2_colon 61 .06 RPM
bodymap2_testis 74 .73 RPM
bodymap2_brain 36 .57 RPM
bodymap2_heart 68 .38 RPM
bodymap2_white_blood_cells 48 .73 RPM
bodymap2_lymph_node 66 .17 RPM
bodymap2_ovary 71 .88 RPM
bodymap2_kidney 137 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000012513 ortholog_one2many 1 retrogene
retro_mluc_1180,
Macaca mulatta ENSMMUG00000008172 ortholog_one2one 1 retrogene
retro_mmul_2129,
Mus musculus ENSMUSG00000023025 ortholog_one2one 1 retrogene
retro_mmus_3568,
Nomascus leucogenys ENSNLEG00000017798 ortholog_one2one 1 retrogene
retro_nleu_2388,
Pan troglodytes ENSPTRG00000004935 ortholog_one2one 1 retrogene
retro_ptro_1003,
Rattus norvegicus ENSRNOG00000049091 ortholog_one2one 1 retrogene
retro_rnor_644,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1483 87.41 77.21
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Download FASTA sequences of all ENSG00000161813 retrocopies