Parental gene: | CD2BP2, ENSG00000169217 |
| Aliases: | CD2BP2, FWP010, LIN1, PPP1R59, Snu40, U5-52K |
| Description: | CD2 (cytoplasmic tail) binding protein 2 [Source:HGNC Symbol;Acc:1656] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 16:30362086..30366682(-) |
>ENSG00000169217
ATGCCAAAGAGGAAAGTGACCTTCCAAGGCGTGGGAGATGAGGAGGATGAGGATGAAATCATTGTCCCCAAGAAGAAGCT
GGTGGACCCTGTGGCTGGGTCAGGGGGTCCTGGGAGCCGCTTTAAAGGCAAACACTCTTTGGATAGCGATGAGGAGGAGG
ATGATGATGATGGGGGGTCCAGCAAATATGACATCTTGGCCTCAGAGGATGTAGAAGGTCAGGAGGCAGCCACACTCCCC
AGCGAGGGGGGTGTTCGGATCACACCCTTTAACCTGCAGGAGGAGATGGAGGAAGGCCACTTTGATGCCGATGGCAACTA
CTTCCTGAACCGGGATGCTCAGATCCGAGACAGCTGGCTGGACAACATTGACTGGGTGAAGATCCGGGAGCGGCCACCTG
GCCAGCGCCAGGCCTCAGACTCGGAGGAGGAGGACAGCTTGGGCCAGACCTCAATGAGTGCCCAAGCCCTCTTGGAGGGA
CTTTTGGAGCTCCTATTGCCTAGAGAGACAGTGGCTGGGGCACTGAGGCGTCTGGGGGCCCGAGGAGGAGGCAAAGGGAG
AAAGGGGCCTGGGCAACCCAGTTCCCCTCAGCGCCTGGACCGGCTCTCCGGGTTGGCCGACCAGATGGTGGCCCGGGGCA
ACCTTGGTGTGTACCAGGAAACAAGGGAACGGTTGGCTATGCGTCTGAAGGGTTTGGGGTGTCAGACCCTAGGACCCCAC
AATCCCACACCCCCACCCTCCCTGGACATGTTCGCTGAGGAGTTGGCGGAGGAGGAACTGGAGACCCCAACCCCTACCCA
GAGAGGAGAAGCAGAGTCGCGGGGAGATGGTCTGGTGGATGTGATGTGGGAATATAAGTGGGAGAACACGGGGGATGCCG
AGCTGTATGGGCCCTTCACCAGCGCCCAGATGCAGACCTGGGTGAGTGAAGGCTACTTCCCGGACGGTGTTTATTGCCGG
AAGCTGGACCCCCCTGGTGGTCAGTTCTACAACTCCAAACGCATTGACTTTGACCTCTACACCTGA
ATGCCAAAGAGGAAAGTGACCTTCCAAGGCGTGGGAGATGAGGAGGATGAGGATGAAATCATTGTCCCCAAGAAGAAGCT
GGTGGACCCTGTGGCTGGGTCAGGGGGTCCTGGGAGCCGCTTTAAAGGCAAACACTCTTTGGATAGCGATGAGGAGGAGG
ATGATGATGATGGGGGGTCCAGCAAATATGACATCTTGGCCTCAGAGGATGTAGAAGGTCAGGAGGCAGCCACACTCCCC
AGCGAGGGGGGTGTTCGGATCACACCCTTTAACCTGCAGGAGGAGATGGAGGAAGGCCACTTTGATGCCGATGGCAACTA
CTTCCTGAACCGGGATGCTCAGATCCGAGACAGCTGGCTGGACAACATTGACTGGGTGAAGATCCGGGAGCGGCCACCTG
GCCAGCGCCAGGCCTCAGACTCGGAGGAGGAGGACAGCTTGGGCCAGACCTCAATGAGTGCCCAAGCCCTCTTGGAGGGA
CTTTTGGAGCTCCTATTGCCTAGAGAGACAGTGGCTGGGGCACTGAGGCGTCTGGGGGCCCGAGGAGGAGGCAAAGGGAG
AAAGGGGCCTGGGCAACCCAGTTCCCCTCAGCGCCTGGACCGGCTCTCCGGGTTGGCCGACCAGATGGTGGCCCGGGGCA
ACCTTGGTGTGTACCAGGAAACAAGGGAACGGTTGGCTATGCGTCTGAAGGGTTTGGGGTGTCAGACCCTAGGACCCCAC
AATCCCACACCCCCACCCTCCCTGGACATGTTCGCTGAGGAGTTGGCGGAGGAGGAACTGGAGACCCCAACCCCTACCCA
GAGAGGAGAAGCAGAGTCGCGGGGAGATGGTCTGGTGGATGTGATGTGGGAATATAAGTGGGAGAACACGGGGGATGCCG
AGCTGTATGGGCCCTTCACCAGCGCCCAGATGCAGACCTGGGTGAGTGAAGGCTACTTCCCGGACGGTGTTTATTGCCGG
AAGCTGGACCCCCCTGGTGGTCAGTTCTACAACTCCAAACGCATTGACTTTGACCTCTACACCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 8 .60 RPM |
| bodymap2_lung | 40 .79 RPM |
| bodymap2_breast | 36 .36 RPM |
| bodymap2_adipose | 38 .58 RPM |
| bodymap2_adrenal | 51 .64 RPM |
| bodymap2_skeletal_muscle | 21 .26 RPM |
| bodymap2_thyroid | 66 .85 RPM |
| bodymap2_prostate | 59 .11 RPM |
| bodymap2_colon | 49 .85 RPM |
| bodymap2_testis | 46 .49 RPM |
| bodymap2_brain | 35 .51 RPM |
| bodymap2_heart | 19 .01 RPM |
| bodymap2_white_blood_cells | 54 .52 RPM |
| bodymap2_lymph_node | 56 .21 RPM |
| bodymap2_ovary | 58 .39 RPM |
| bodymap2_kidney | 43 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000014271 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021844 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015767 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007267 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007995 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3900 | 82.69 | 60.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000169217 retrocopies