Parental gene:

RNMTL1, ENSG00000171861

Aliases:None
Description:RNA methyltransferase like 1 [Source:HGNC Symbol;Acc:18485]
Organism:Human (Homo sapiens)
Coordinates:17:685512..695749(+)


>ENSG00000171861
ATGGCGGCGCTGGTGAGACCCGCGAGGTTTGTCGTGCGACCGTTGCTGCAGGTGGTCCAGGCTTGGGACCTTGACGCGAG
GCGCTGGGTCCGGGCGCTGCGGCGGAGCCCAGTGAAAGTGGTGTTTCCTTCCGGAGAGGTGGTGGAACAGAAGCGCGCTC
CTGGGAAGCAGCCCCGCAAGGCACCATCTGAGGCCAGTGCCCAGGAGCAACGAGAGAAACAACCGCTCGAGGAGTCCGCA
TCCCGCGCTCCCAGCACCTGGGAAGAGTCTGGGCTTCGCTACGATAAAGCTTATCCCGGGGACAGGAGGCTGAGCAGTGT
AATGACAATAGTAAAGTCCAGGCCATTTCGGGAAAAACAAGGGAAGATCCTGCTGGAAGGTCGCAGGCTCATTTCAGACG
CTCTCAAGGCTGGAGCTGTGCCAAAAATGTTCTTCTTTAGCCGTCTAGAATACCTAAAGGAGTTGCCAGTCGATAAGCTG
AAAGGTGTCAGCCTCATTAAGGTGAAATTTGAGGATATCAAGGATTGGTCCGACCTCGTAACGCCACAAGGAATAATGGG
GATTTTTGCCAAGCCTGACCATGTTAAGATGACATATCCAAAGACTCAGCTTCAGCATTCACTGCCTTTATTATTGATTT
GTGACAATCTCCGTGACCCTGGGAACCTGGGGACAATTCTGAGATCTGCAGCTGGGGCAGGCTGCAGCAAAGTGTTACTC
ACCAAAGGCTGTGTGGATGCCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGGGCGCACATTTCCGGATGCCCATTATCAA
TAATCTGGAATGGGAAACCGTGCCCAATTACCTGCCCCCTGACACTCGGGTCTATGTGGCTGACAACTGTGGCCTTTATG
CCCAGGCTGAGATGTCTAATAAAGCTAGTGACCATGGCTGGGTGTGTGATCAACGAGTGATGAAGTTTCACAAGTATGAG
GAAGAGGAAGATGTAGAAACCGGAGCCAGTCAAGATTGGCTGCCTCATGTTGAGGTTCAGAGTTACGACTCGGACTGGAC
AGAGGCGCCGGCAGCTGTGGTGATTGGCGGGGAGACCTACGGCGTGAGCCTGGAGTCCCTGCAGCTGGCCGAGAGCACTG
GTGGCAAGAGGCTGCTGATCCCCGTTGTGCCTGGTGTGGACAGCCTCAACTCGGCCATGGCGGCAAGCATCCTGCTTTTC
GAAGGGAAAAGACAGCTGCGGGGGAGGGCGGAGGACTTGAGCAGGGACAGGAGTTACCACTGA

Library Parental gene expression (RPM)
bodymap2_liver 11 .41 RPM
bodymap2_lung 4 .91 RPM
bodymap2_breast 10 .21 RPM
bodymap2_adipose 6 .82 RPM
bodymap2_adrenal 11 .03 RPM
bodymap2_skeletal_muscle 12 .09 RPM
bodymap2_thyroid 14 .93 RPM
bodymap2_prostate 11 .08 RPM
bodymap2_colon 7 .68 RPM
bodymap2_testis 21 .53 RPM
bodymap2_brain 5 .84 RPM
bodymap2_heart 9 .80 RPM
bodymap2_white_blood_cells 8 .23 RPM
bodymap2_lymph_node 6 .94 RPM
bodymap2_ovary 9 .10 RPM
bodymap2_kidney 9 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021701 ortholog_one2one 1 retrogene
retro_cjac_3130,
Gorilla gorilla ENSGGOG00000015518 ortholog_one2one 1 retrogene
retro_ggor_2505,
Macaca mulatta ENSMMUG00000011423 ortholog_one2one 1 retrogene
retro_mmul_1709,
Nomascus leucogenys ENSNLEG00000000570 ortholog_one2one 1 retrogene
retro_nleu_180,
Pongo abelii ENSPPYG00000007762 ortholog_one2one 1 retrogene
retro_pabe_3149,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3704 78.50 75.71
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Download FASTA sequences of all ENSG00000171861 retrocopies