Parental gene: | RNMTL1, ENSPPYG00000007762 |
| Aliases: | None |
| Description: | RNA methyltransferase like 1 [Source:HGNC Symbol;Acc:18485] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:607557..618822(+) |
>ENSPPYG00000007762
ATGGCGGCGCTGGTGAAACCCGGGAGGTTTGTCGTGCGAGCGTTGCTGCGGGTGGTCCAGGCTTGGGACCTTGACGCGAG
GCGCTGGGTCCGGGCGCTGCGGCGGAGCCCAGTGAAAGTGGTGTTTCCTTCCGGAGAGGTGGTGGAACAGAAGCGCGCTC
CTGGGAAGCAGCCCCGCAAGGCAGCATCTGAGGCCAGTACCCGGGAGCAACGAGAGAAACAACCGCTCGAGGAGTCCGCA
TCCCACGCTCCCAGCACCTGGGAAGAGTCTGGGCTTCGCTACGATAAAGCTTATTCCGGGGACAGGAGGCTGAGCAGTGT
AATGACAATAGTAAAGTCCAGGCCATTTCGGGAAAAACAAGGGAAGATCCTGCTGGAAGGTCGCAGGCTCATTGCAGACG
CTCTCAAGGCTGGAGCTGTGCCAAAAATGTTCTTCTTTAGCCGTCTAGAATACCTAAAGGAGCTGCCAGTCGATAAGCTG
AAAGGTGTCAGCCTCATTAAGGTGAAATTTGAGGATATCAAGGATTGGTCCGACCTCGTAACGCCACAAGGAATAATGGG
TTANNNNNNNNNNNNTGACCATGTTAAGATGACATATCCAAAGACTCAGCTTCAGCATTCACTGCCTTTATTATTGATTT
GTGACAATCTCCGTGACCCTGGGAACCTGGGGACAATTCTGAGATCTGCAGCTGGGGCAGGCTGCAGCAAAGTGTTACTC
ACCAAAGGCTGTGTGGATGCCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGGGCGCACATTTCCAGGTGCCCATTATCAA
TAATCTAGAATGGGAAACCGTGCCCAATTATCTGCCCCCTGACACCCGGGTCTACGTGGCTGACAACTGTGGCCTTTATG
CCCAGGCTGAGATGTCTAATAAAGCTAGTGACCATGGCTGGGTGTGTGATCAACGAGTGCTGAAGTTTCACAAGTATGAA
GAAGAGGAAGATGTAGAAACTGGAGCCAGTCAAGATTGGCTGCCTGATGTTGAGGTTCAGAGTTACGACTCGGACTGGAC
AGAGGCACCAGCAGCTGTGGTGATTGGCGGGGAGACCTACGGCGTGAGCCTGGAGTCCCTGCAGCTGGCCGAGAGCACTG
GTGGCAAGAGGCTGCTGATCCCCGTTGTGCCTGGTGTGGACAGCCTCAACTCGGCCATGGCGGCAAGCATCCTGCTTTTC
GAAGGGAAAAGACAGCTGCGGGGGAAGGCGGAGGACTTAAGCAGGGACAGGAGTTACCAC
ATGGCGGCGCTGGTGAAACCCGGGAGGTTTGTCGTGCGAGCGTTGCTGCGGGTGGTCCAGGCTTGGGACCTTGACGCGAG
GCGCTGGGTCCGGGCGCTGCGGCGGAGCCCAGTGAAAGTGGTGTTTCCTTCCGGAGAGGTGGTGGAACAGAAGCGCGCTC
CTGGGAAGCAGCCCCGCAAGGCAGCATCTGAGGCCAGTACCCGGGAGCAACGAGAGAAACAACCGCTCGAGGAGTCCGCA
TCCCACGCTCCCAGCACCTGGGAAGAGTCTGGGCTTCGCTACGATAAAGCTTATTCCGGGGACAGGAGGCTGAGCAGTGT
AATGACAATAGTAAAGTCCAGGCCATTTCGGGAAAAACAAGGGAAGATCCTGCTGGAAGGTCGCAGGCTCATTGCAGACG
CTCTCAAGGCTGGAGCTGTGCCAAAAATGTTCTTCTTTAGCCGTCTAGAATACCTAAAGGAGCTGCCAGTCGATAAGCTG
AAAGGTGTCAGCCTCATTAAGGTGAAATTTGAGGATATCAAGGATTGGTCCGACCTCGTAACGCCACAAGGAATAATGGG
TTANNNNNNNNNNNNTGACCATGTTAAGATGACATATCCAAAGACTCAGCTTCAGCATTCACTGCCTTTATTATTGATTT
GTGACAATCTCCGTGACCCTGGGAACCTGGGGACAATTCTGAGATCTGCAGCTGGGGCAGGCTGCAGCAAAGTGTTACTC
ACCAAAGGCTGTGTGGATGCCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGGGCGCACATTTCCAGGTGCCCATTATCAA
TAATCTAGAATGGGAAACCGTGCCCAATTATCTGCCCCCTGACACCCGGGTCTACGTGGCTGACAACTGTGGCCTTTATG
CCCAGGCTGAGATGTCTAATAAAGCTAGTGACCATGGCTGGGTGTGTGATCAACGAGTGCTGAAGTTTCACAAGTATGAA
GAAGAGGAAGATGTAGAAACTGGAGCCAGTCAAGATTGGCTGCCTGATGTTGAGGTTCAGAGTTACGACTCGGACTGGAC
AGAGGCACCAGCAGCTGTGGTGATTGGCGGGGAGACCTACGGCGTGAGCCTGGAGTCCCTGCAGCTGGCCGAGAGCACTG
GTGGCAAGAGGCTGCTGATCCCCGTTGTGCCTGGTGTGGACAGCCTCAACTCGGCCATGGCGGCAAGCATCCTGCTTTTC
GAAGGGAAAAGACAGCTGCGGGGGAAGGCGGAGGACTTAAGCAGGGACAGGAGTTACCAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .60 RPM |
| SRP007412_cerebellum | 8 .03 RPM |
| SRP007412_heart | 7 .22 RPM |
| SRP007412_kidney | 9 .25 RPM |
| SRP007412_liver | 7 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021701 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000171861 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015518 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011423 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000570 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3149 | 76.69 | 76.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000007762 retrocopies