Parental gene:

SELT, ENSG00000198843

Aliases:None
Description:selenoprotein T precursor [Source:RefSeq peptide;Acc:NP_057359]
Organism:Human (Homo sapiens)
Coordinates:3:150320661..150348222(+)


>ENSG00000198843
ATGAGGCTTCTGCTGCTTCTCCTAGTGGCGGCGTCTGCGATGGTCCGGAGCGAGGCCTCGGCCAATCTGGGCGGCGTGCC
CAGCAAGAGATTAAAGATGCAGTACGCCACGGGGCCGCTGCTCAAGTTCCAGATTTGTGTTTCCTGAGGTTATAGGCGGG
TGTTTGAGGAGTACATGCGGGTTATTAGCCAGCGGTACCCAGACATCCGCATTGAAGGAGAGAATTACCTCCCTCAACCA
ATATATAGACACATAGCATCTTTCCTGTCAGTCTTCAAACTAGTATTAATAGGCTTAATAATTGTTGGCAAGGATCCTTT
TGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAGGTTTATGCATGTATGATGGTTTTCT
TCTTGAGCAACATGATTGAGAACCAGTGTATGTCAACAGGTGCATTTGAGATAACTTTAAATGATGTACCTGTGTGGTCT
AAGCTGGAATCTGGTCACCTTCCATCCATGCAACAACTTGTTCAAATTCTTGACAATGAAATGAAGCTCAATGTGCATAT
GGATTCAATCCCACACCATCGATCATAG

Library Parental gene expression (RPM)
bodymap2_adipose 48 .20 RPM
bodymap2_adrenal 86 .83 RPM
bodymap2_brain 152 .97 RPM
bodymap2_breast 82 .32 RPM
bodymap2_colon 83 .28 RPM
bodymap2_heart 61 .72 RPM
bodymap2_kidney 143 .09 RPM
bodymap2_liver 64 .64 RPM
bodymap2_lung 90 .14 RPM
bodymap2_lymph_node 114 .06 RPM
bodymap2_ovary 91 .04 RPM
bodymap2_prostate 94 .50 RPM
bodymap2_skeletal_muscle 38 .16 RPM
bodymap2_testis 94 .93 RPM
bodymap2_thyroid 88 .83 RPM
bodymap2_white_blood_cells 148 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001394 ortholog_one2one 2 retrogenes
retro_chof_1199, retro_chof_768,
Equus caballus ENSECAG00000025123 ortholog_one2one 2 retrogenes
retro_ecab_441, retro_ecab_662,
Gorilla gorilla ENSGGOG00000028291 ortholog_one2one 1 retrogene
retro_ggor_1892,
Macropus eugenii ENSMEUG00000014738 ortholog_one2one 3 retrogenes
retro_meug_1766, retro_meug_1786, retro_meug_2036,
Monodelphis domestica ENSMODG00000021273 ortholog_one2many 1 retrogene
retro_mdom_467,
Mus musculus ENSMUSG00000075700 ortholog_one2one 1 retrogene
retro_mmus_3111,
Nomascus leucogenys ENSNLEG00000003284 ortholog_one2one 2 retrogenes
retro_nleu_2473, retro_nleu_972,
Ochotona princeps ENSOPRG00000014425 ortholog_one2one 2 retrogenes
retro_opri_1052, retro_opri_584,
Pan troglodytes ENSPTRG00000039581 ortholog_one2one 1 retrogene
retro_ptro_2804,
Rattus norvegicus ENSRNOG00000013507 ortholog_one2one 1 retrogene
retro_rnor_2069,
Sarcophilus harrisii ENSSHAG00000018506 ortholog_one2one 1 retrogene
retro_shar_629,
Tarsius syrichta ENSTSYG00000007410 ortholog_one2one 3 retrogenes
retro_tsyr_1515, retro_tsyr_167, retro_tsyr_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3384 70.94 59.49
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2. retro_hsap_4126 94.68 95.90
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Download FASTA sequences of all ENSG00000198843 retrocopies