Parental gene:

ENSPTRG00000039581

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:154297153..154301909(+)


>ENSPTRG00000039581
GTTTCCGGCTATAGGCGGGTGTTTGAGGAGTACATGCGGGTTATTAGCCAGCGGTACCCAGACATCCGCATTGAAGGAGA
GAATTACCTCCCTCAACCAATATATAGACACATAGCATCTTTCCTGTCAGTCTTCAAACTAGTATTAATAGGCTTAATAA
TTGTTGGCAAGGATCCTTTTGCTTTCTTTGGCATGCAAGCTCCTAGCATCTGGCAGTGGGGCCAAGAAAATAAGGTTTAT
GCATGTATGATGGTTTTCTTCTTGAGCAACATGATTGAGAACCAGTGTATGTCAACAGGTGCATTTGAGATAACTTTAAA
TGATGTACCTGTGTGGTCTAAGCTGGAATCTGGTCACCTTCCATCCATGCAACAACTTGTTCAAATTCTTGACAATGAAA
TGAAGCTCAATGTGCATATGGATTCAATCCCACACCATCGATCATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .82 RPM
SRP007412_cerebellum 14 .09 RPM
SRP007412_heart 9 .15 RPM
SRP007412_kidney 25 .39 RPM
SRP007412_liver 7 .95 RPM
SRP007412_testis 9 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001394 ortholog_one2one 2 retrogenes
retro_chof_1199, retro_chof_768,
Equus caballus ENSECAG00000025123 ortholog_one2one 2 retrogenes
retro_ecab_441, retro_ecab_662,
Homo sapiens ENSG00000198843 ortholog_one2one 2 retrogenes
retro_hsap_3384, retro_hsap_4126,
Gorilla gorilla ENSGGOG00000028291 ortholog_one2one 1 retrogene
retro_ggor_1892,
Macropus eugenii ENSMEUG00000014738 ortholog_one2one 3 retrogenes
retro_meug_1766, retro_meug_1786, retro_meug_2036,
Monodelphis domestica ENSMODG00000021273 ortholog_one2many 1 retrogene
retro_mdom_467,
Mus musculus ENSMUSG00000075700 ortholog_one2one 1 retrogene
retro_mmus_3111,
Nomascus leucogenys ENSNLEG00000003284 ortholog_one2one 2 retrogenes
retro_nleu_2473, retro_nleu_972,
Ochotona princeps ENSOPRG00000014425 ortholog_one2one 2 retrogenes
retro_opri_1052, retro_opri_584,
Rattus norvegicus ENSRNOG00000013507 ortholog_one2one 1 retrogene
retro_rnor_2069,
Sarcophilus harrisii ENSSHAG00000018506 ortholog_one2one 1 retrogene
retro_shar_629,
Tarsius syrichta ENSTSYG00000007410 ortholog_one2one 3 retrogenes
retro_tsyr_1515, retro_tsyr_167, retro_tsyr_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2804 96.58 98.65
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Download FASTA sequences of all ENSPTRG00000039581 retrocopies