Parental gene: | LYPLA2, ENSGGOG00000004330 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 1:24599633..24604017(+) |
>ENSGGOG00000004330
ATGTGTGGTAACACCATGTCTGTGCCCCTGCTCACCGATGCTGCCACCGTGTCTGGAGCTGAGCGGGAAACGGCCGCGGT
TATTTTTTTACATGGACTTGGAGACACAGGGCACAGCTGGGCTGACGCCCTCTCCACCATCCGGCTCCCTCACGTCAAGT
ACATCTGTCCCCATGCGCCTAGGATCCCTGTGACCCTCAACATGAAGATGGTGATGCCCTCCTGGTTTGACCTGATGGGG
CTGAGTCCAGATGCCCCAGAGGACGAGGCTGGCATCAAGAAGGCAGCAGAGAACATCAAGGCCTTGATTGAGCATGAAAT
GAAGAACGGGATCCCTGCCAATCGAATCGTCCTGGGAGGCTTTTCACAGGGCGGGGCCCTGTCCCTCTACACGGCCCTTA
CCTGCCCCCACCCTCTGGCTGGCATCGTGGCATTGAGCTGCTGGCTGCCTCTGCACCGGGCCTTCCCCCAGGCAGCTAAT
GGCAGTGCCAAGGACCTGGCCATACTCCAGTGCCATGGGGAGCTGGACCCCATGGTGCCCGTACGGTTTGGGGCCCTGAC
GGCTGAGAAGCTCCGGTCTGTTGTCACACCTGCCAGGGTCCAGTTCAAGACATACCCGGGTGTCATGCACAGCTCCTGTC
CTCAGGAGATGGCAGCTGTGAAGGAATTTCTTGAGAAGCTGCTGCCTCCTGTCTAA
ATGTGTGGTAACACCATGTCTGTGCCCCTGCTCACCGATGCTGCCACCGTGTCTGGAGCTGAGCGGGAAACGGCCGCGGT
TATTTTTTTACATGGACTTGGAGACACAGGGCACAGCTGGGCTGACGCCCTCTCCACCATCCGGCTCCCTCACGTCAAGT
ACATCTGTCCCCATGCGCCTAGGATCCCTGTGACCCTCAACATGAAGATGGTGATGCCCTCCTGGTTTGACCTGATGGGG
CTGAGTCCAGATGCCCCAGAGGACGAGGCTGGCATCAAGAAGGCAGCAGAGAACATCAAGGCCTTGATTGAGCATGAAAT
GAAGAACGGGATCCCTGCCAATCGAATCGTCCTGGGAGGCTTTTCACAGGGCGGGGCCCTGTCCCTCTACACGGCCCTTA
CCTGCCCCCACCCTCTGGCTGGCATCGTGGCATTGAGCTGCTGGCTGCCTCTGCACCGGGCCTTCCCCCAGGCAGCTAAT
GGCAGTGCCAAGGACCTGGCCATACTCCAGTGCCATGGGGAGCTGGACCCCATGGTGCCCGTACGGTTTGGGGCCCTGAC
GGCTGAGAAGCTCCGGTCTGTTGTCACACCTGCCAGGGTCCAGTTCAAGACATACCCGGGTGTCATGCACAGCTCCTGTC
CTCAGGAGATGGCAGCTGTGAAGGAATTTCTTGAGAAGCTGCTGCCTCCTGTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .58 RPM |
| SRP007412_cerebellum | 18 .75 RPM |
| SRP007412_heart | 10 .88 RPM |
| SRP007412_kidney | 31 .24 RPM |
| SRP007412_liver | 19 .86 RPM |
| SRP007412_testis | 9 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011625 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000020914 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011285 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004768 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000005841 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000032260 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001733 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016127 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_2114 | 63.68 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2413 | 92.39 | 84.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2626 | 50.30 | 71.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000004330 retrocopies