Parental gene: | PRPF4B, ENSGGOG00000006422 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 6:4053728..4096775(+) |
>ENSGGOG00000006422
ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGCTAATTCTGAAAAGAGTATAAATGAAGA
AAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAAC
ATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCATAAACATAAGAAACACAAAAGA
AAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCTAGA
AGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATGAGTTAATGGAAGGAAAGGTCCAGTCTGGTATGG
GGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAGGGGGAGATTCATGAAAAGGCAAGAAATGGAAATAGGTCT
AGTACTAGATCTTCAAGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAATTACTACAAAAAAACGAAGTAAAAGCAG
ATCCAAAGAACGGACTAGACATAGGTCTGATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTA
GGAGCAAGTCAAAGGAGAGGAAAAAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAA
TCCCCTACCCTTAGAAGGCGATCTCAAGAGAAAATTGGTAAGGCCAGATCGCCTACTGATGATAAGGTTAAAATTGAAGA
TAAAAGTAAATCAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGTGATCGAGGTAAAAAATCCAGAT
CCCCAGTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGAT
AAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGTAGAAGACCTGG
TCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCACTTTTGAATGATA
GAAGATCTAAGCAGAGCAAATCCCCCTCGCGGACACTGTCTCCTGGGAGAAGAGCCAAGAGCCGATCCTTAGAAAGAAAA
CGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAACCCGAAGAAGAAGTAGATCTCCCATTAGAAGGAGGTCTCGTTC
CCCACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTCCTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCAC
GCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGACGAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGA
AGTCTTTCTGAAGGAATGAAAGTTGAGCAGGAATCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGA
TGAAGAAGCCCTAATAGAACAGAGAAGAATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCA
ATATGTCTGTGCCATCTGAACCAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAG
CGAGTAGCTGCTGATGTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCT
AATGACAGTTGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGT
TTGCTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGAGAT
AACTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTATGGCTACAC
TGGGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGGCTGTAAAGATCATCA
GAAACAATGAACTCATGCAAAAGACTGGTTTAAAGGAATTAGAGTTCTTGAAAAAACTTAATGATGCTGATCCTGATGAC
AAATTTCATTGTCTGAGACTCTTCAGGCACTTCTATCACAAGCAGCATCTTTGTCTCGTATTCGAGCCTCTCAGCATGAA
CTTACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATATTAAAGCTGTAAGATCCTATAGTCAGCAGTTGT
TCCTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACATGCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCC
AAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTCACATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAG
ATTTTATCGTGCTCCTGAAATCATTATAGGTAAAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTAT
ACGAACTCTATACTGGAAAAATTTTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGA
AAGATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGA
AGTTGATAAAGTAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGA
TTGGGTGCCAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTG
GACCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATTTAA
ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGCTAATTCTGAAAAGAGTATAAATGAAGA
AAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAAC
ATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCATAAACATAAGAAACACAAAAGA
AAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCTAGA
AGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATGAGTTAATGGAAGGAAAGGTCCAGTCTGGTATGG
GGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAGGGGGAGATTCATGAAAAGGCAAGAAATGGAAATAGGTCT
AGTACTAGATCTTCAAGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAATTACTACAAAAAAACGAAGTAAAAGCAG
ATCCAAAGAACGGACTAGACATAGGTCTGATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTA
GGAGCAAGTCAAAGGAGAGGAAAAAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAA
TCCCCTACCCTTAGAAGGCGATCTCAAGAGAAAATTGGTAAGGCCAGATCGCCTACTGATGATAAGGTTAAAATTGAAGA
TAAAAGTAAATCAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGTGATCGAGGTAAAAAATCCAGAT
CCCCAGTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGAT
AAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGTAGAAGACCTGG
TCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCACTTTTGAATGATA
GAAGATCTAAGCAGAGCAAATCCCCCTCGCGGACACTGTCTCCTGGGAGAAGAGCCAAGAGCCGATCCTTAGAAAGAAAA
CGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAACCCGAAGAAGAAGTAGATCTCCCATTAGAAGGAGGTCTCGTTC
CCCACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTCCTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCAC
GCTTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGACGAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGA
AGTCTTTCTGAAGGAATGAAAGTTGAGCAGGAATCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGA
TGAAGAAGCCCTAATAGAACAGAGAAGAATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCA
ATATGTCTGTGCCATCTGAACCAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAG
CGAGTAGCTGCTGATGTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCT
AATGACAGTTGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGT
TTGCTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGAGAT
AACTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTATGGCTACAC
TGGGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGGCTGTAAAGATCATCA
GAAACAATGAACTCATGCAAAAGACTGGTTTAAAGGAATTAGAGTTCTTGAAAAAACTTAATGATGCTGATCCTGATGAC
AAATTTCATTGTCTGAGACTCTTCAGGCACTTCTATCACAAGCAGCATCTTTGTCTCGTATTCGAGCCTCTCAGCATGAA
CTTACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATATTAAAGCTGTAAGATCCTATAGTCAGCAGTTGT
TCCTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACATGCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCC
AAAACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTCACATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAG
ATTTTATCGTGCTCCTGAAATCATTATAGGTAAAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTAT
ACGAACTCTATACTGGAAAAATTTTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGA
AAGATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGA
AGTTGATAAAGTAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGA
TTGGGTGCCAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTG
GACCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 30 .07 RPM |
| SRP007412_cerebellum | 41 .01 RPM |
| SRP007412_heart | 8 .54 RPM |
| SRP007412_kidney | 44 .77 RPM |
| SRP007412_liver | 33 .21 RPM |
| SRP007412_testis | 75 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000112739 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009438 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005901 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009756 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011291 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017683 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_2821 | 79.74 | 63.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000006422 retrocopies