Parental gene: | PRPF4B, ENSPTRG00000017683 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 6:4021154..4067464(+) |
>ENSPTRG00000017683
ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGCTAATTCTGAAAAGAGTATAAATGAAGA
AAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAAC
ATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCATAAACATAAGAAACACAAAAGA
AAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCTAGA
AGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATGAGTTAATGGAAGGAAAGGTCCAGTCTGGTATGG
GGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAGGGGGAGATTCATGAAAAGGCAAGAAATGGAAATAGGTCT
AGTACTAGATCTTCAAGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAATTACTACAAAAAAACGAAGTAAAAGCAG
ATCCAAAGAACGGACTAGACATAGGTCTGATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTA
GGAGCAAGTCAAAGGAGAGGAAAAAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAA
TCCCCTACCCTTAGAAGGCGATCTCAAGAGAAAATTGGTAAGGCCAGATCTCCTACTGATGATAAGGTTAAAATTGAAGA
TAAAAGTAAATCAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCCAGAT
CCCCAGTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGAT
AAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGCAGAAGACCTGG
TCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCACTTTTGAATGATA
GAAGATCTAAGCAGAGCAAATCCCCCTCGCGGACACTGTCACCTGGGAGAAGAGCCAAGAGCCGATCCTTAGAAAGAAAA
CGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAAGAACACGACCTCGAGATGATATCCTCAGTAGACGTGAAAGATC
AAAAGATGCCAGCCCCATCAATAGATGGTCTCCAACCCGAAGAAGAAGTAGATCTCCCATTAGAAGGAGGTCTCGTTCCC
CACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTCCTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCACGC
TTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGACGAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAG
TCTTTCTGAAGGAATGAAAGTTGAGCAGGAATCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGATG
AAGAAGCCCTAATAGAACAGAGAAGAATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCAAC
ATGTCTGTGCCATCTGAACCAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAGCG
AGTAGCTGCTGATGTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCTAA
TGACAGTTGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTT
GCTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGAGATAA
CTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTATGGCTACACTG
GGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGGCTGTAAAGATCATCAGA
AACAATGAGCTCATGCAAAAGACTGGTTTAAAAGAATTAGAGTTCTTGAAAAAACTTAATGATGCTGATCCTGATGACAA
ATTTCATTGTCTGAGACTCTTCAGGCACTTCTATCACAAGCAGCATCTTTGTCTCGTATTCGAGCCTCTCAGCATGAACT
TACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATATTAAAGCTGTAAGATCCTATAGTCAGCAGTTGTTC
CTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACATGCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCCAA
AACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTCACATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGAT
TTTATCGTGCTCCTGAAATCATTATAGGTAAAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTATAC
GAACTCTATACTGGAAAAATTTTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGAAA
GATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAG
TTGATAAAGTAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATT
GGGTGCCAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGA
CCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATTTAA
ATGGCCGCCGCGGAGACCCAGTCGCTACGGGAGCAGCCAGAGATGGAAGATGCTAATTCTGAAAAGAGTATAAATGAAGA
AAATGGAGAAGTATCAGAAGACCAGTCTCAAAATAAGCACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAAC
ATAAGAAACATAAACATTCCTCAGAAGAAGACAAGGATAAAAAACATAAACATAAGCATAAACATAAGAAACACAAAAGA
AAAGAGGTTATTGATGCTTCTGATAAAGAGGGTATGTCTCCAGCAAAAAGAACTAAACTTGATGATTTAGCTTTGCTAGA
AGACTTGGAAAAACAGAGAGCCTTGATTAAGGCCGAACTTGATAATGAGTTAATGGAAGGAAAGGTCCAGTCTGGTATGG
GGCTCATTTTGCAAGGTTATGAGTCTGGCTCTGAAGAAGAGGGGGAGATTCATGAAAAGGCAAGAAATGGAAATAGGTCT
AGTACTAGATCTTCAAGTACAAAGGGGAAACTTGAACTTGTGGACAATAAAATTACTACAAAAAAACGAAGTAAAAGCAG
ATCCAAAGAACGGACTAGACATAGGTCTGATAAAAAGAAAAGTAAGGGGGGTATTGAAATCGTTAAAGAGAAAACAACTA
GGAGCAAGTCAAAGGAGAGGAAAAAATCTAAAAGCCCATCCAAAAGAAGTAAGTCTCAAGATCAAGCAAGGAAATCAAAA
TCCCCTACCCTTAGAAGGCGATCTCAAGAGAAAATTGGTAAGGCCAGATCTCCTACTGATGATAAGGTTAAAATTGAAGA
TAAAAGTAAATCAAAAGATAGGAAAAAATCCCCAATTATAAATGAAAGTAGAAGTCGCGATCGAGGTAAAAAATCCAGAT
CCCCAGTTGATTTAAGAGGTAAATCCAAAGACAGAAGGTCACGGTCCAAAGAGAGAAAATCAAAACGGTCTGAAACTGAT
AAAGAAAAGAAGCCAATTAAATCTCCCTCTAAAGATGCTTCATCTGGGAAAGAAAATAGGTCACCCAGCAGAAGACCTGG
TCGTAGTCCTAAAAGAAGAAGTTTGTCTCCAAAACCACGTGATAAATCAAGAAGAAGCAGGTCTCCACTTTTGAATGATA
GAAGATCTAAGCAGAGCAAATCCCCCTCGCGGACACTGTCACCTGGGAGAAGAGCCAAGAGCCGATCCTTAGAAAGAAAA
CGACGAGAACCAGAGAGGAGACGACTTTCTTCTCCAAGAACACGACCTCGAGATGATATCCTCAGTAGACGTGAAAGATC
AAAAGATGCCAGCCCCATCAATAGATGGTCTCCAACCCGAAGAAGAAGTAGATCTCCCATTAGAAGGAGGTCTCGTTCCC
CACTCAGACGTAGCAGGTCTCCAAGAAGAAGAAGCAGATCTCCTCGGAGAAGGGACAGAGGTCGGAGGAGCAGATCACGC
TTGCGAAGGCGGTCTCGATCACGCGGTGGTCGTAGACGAAGGAGCAGAAGCAAAGTAAAGGAAGATAAATTTAAAGGAAG
TCTTTCTGAAGGAATGAAAGTTGAGCAGGAATCTTCGTCTGATGATAACCTTGAAGACTTTGATGTAGAGGAAGAAGATG
AAGAAGCCCTAATAGAACAGAGAAGAATCCAAAGGCAGGCAATTGTTCAGAAATATAAATACCTTGCTGAAGATAGCAAC
ATGTCTGTGCCATCTGAACCAAGCAGCCCCCAGAGCAGTACGAGAACACGATCACCATCTCCAGATGACATTCTGGAGCG
AGTAGCTGCTGATGTTAAAGAGTATGAACGGGAAAATGTTGATACATTTGAGGCCTCAGTGAAAGCCAAGCATAATCTAA
TGACAGTTGAACAGAATAATGGTTCATCTCAGAAGAAGTTGTTGGCACCTGATATGTTTACAGAATCTGATGATATGTTT
GCTGCGTATTTTGATAGTGCTCGTCTTCGGGCCGCTGGCATTGGAAAAGATTTCAAAGAGAATCCCAACCTCAGAGATAA
CTGGACCGATGCAGAAGGCTATTATCGTGTGAACATAGGTGAAGTCCTAGATAAACGTTACAATGTGTATGGCTACACTG
GGCAAGGTGTATTCAGTAATGTTGTACGAGCCAGAGATAATGCAAGAGCCAACCAAGAAGTGGCTGTAAAGATCATCAGA
AACAATGAGCTCATGCAAAAGACTGGTTTAAAAGAATTAGAGTTCTTGAAAAAACTTAATGATGCTGATCCTGATGACAA
ATTTCATTGTCTGAGACTCTTCAGGCACTTCTATCACAAGCAGCATCTTTGTCTCGTATTCGAGCCTCTCAGCATGAACT
TACGAGAGGTGTTAAAAAAATATGGTAAAGATGTTGGTCTTCATATTAAAGCTGTAAGATCCTATAGTCAGCAGTTGTTC
CTGGCATTGAAACTCCTTAAAAGATGCAATATCCTACATGCAGATATCAAGCCAGACAATATCCTGGTTAATGAATCCAA
AACTATTTTAAAGCTTTGCGATTTTGGGTCGGCTTCACATGTTGCGGATAATGACATAACACCTTATCTTGTCAGTAGAT
TTTATCGTGCTCCTGAAATCATTATAGGTAAAAGCTATGACTATGGTATAGATATGTGGTCTGTAGGTTGCACCTTATAC
GAACTCTATACTGGAAAAATTTTATTCCCTGGCAAAACCAATAACCATATGCTGAAGCTTGCAATGGATCTCAAAGGAAA
GATGCCAAATAAGATGATTCGAAAAGGTGTGTTCAAAGATCAGCATTTTGATCAAAATCTCAACTTCATGTACATAGAAG
TTGATAAAGTAACAGAGAGGGAGAAAGTTACTGTTATGAGCACCATTAATCCAACTAAGGACCTGTTGGCTGACTTGATT
GGGTGCCAGAGACTTCCTGAAGACCAACGTAAGAAAGTACACCAGCTAAAGGACTTGTTGGACCAGATTCTGATGTTGGA
CCCAGCTAAACGAATTAGCATCAACCAGGCCCTACAGCATGCCTTCATCCAGGAAAAAATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 40 .95 RPM |
| SRP007412_cerebellum | 63 .60 RPM |
| SRP007412_heart | 44 .19 RPM |
| SRP007412_kidney | 64 .31 RPM |
| SRP007412_liver | 29 .33 RPM |
| SRP007412_testis | 43 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000112739 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006422 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005901 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009756 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011291 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001419 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007278 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2859 | 82.61 | 60.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000017683 retrocopies