Parental gene:

TCP1, ENSGGOG00000014063

Aliases:None
Description:t-complex 1 [Source:HGNC Symbol;Acc:11655]
Organism:Gorilla (Gorilla gorilla)
Coordinates:6:160968388..160979452(-)


>ENSGGOG00000014063
NNGGAGGGGCCTTTGTCCGTGTTCGGTGACCGCAGCACTGGGGAAACGATCCGCTCCCAGAACGTTATGGCTGCAGCTTC
GATTGCCAATATTGTAAAAAGTTCTCTCGGTCCAGTTGGCTTGGATAAAATGTTGGTGGATGATATTGGTGATGTAACCA
TTACTAACGATGGTGCAACCATCCTGAAGTTACTGGAGGTAGAACATCCTGCAGCTAAAGTTCTTTGTGAGCTGGCTGAT
CTGCAAGACAAAGAAGTTGGAGATGGAACTACTTCAGTGGTTATTATTGCAGCAGAACTCCTAAAAAATGCAGATGAATT
AGTCAAACAGAAAATTCATCCCACATCAGTTATTAGTGGCTATCGACTTGCTTGCAAGGAAGCAGTGCGTTATATCAATG
AAAACCTAATTGTTAACACAGATGAACTGGGAAGAGATTGCCTGATTAATGCTGCTAAGACATCCATGTCTTCCAAAATC
ATTGGAATAAATGGTGATTTCTTTGCTAACATGGTAGTAGATGCTGTACTTGCTATTAAATACACAGACATAAGAGGCCA
GCCACGCTATCCAGTCAATTCTGTTAATATTTTGAAAGCCCATGGGAGAAGTCAAATGGAGAGTATGCTCATCAGTGGCT
ATGCACTCAACTGTGTGGTGGGATCCCAGGGCATGCCCAAGAGAATCGTAAATGCAAAAATTGCTTGCCTTGACTTCAGC
CTGCAAAAAACAAAAATGAAGCTTGGTGTACAGGTGGTCATTACAGACCCTGAAAAACTGGACCAAATTAGACAGAGAGA
ATCAGATATCACCAAGGAGAGAATTCAGAAGATCCTGGCAACCGGTGCCAATGTTATTCTAACCACTGGTGGAATTGACG
ATATGTGTCTGAAGTATTTTGTGGAGGCTGGTGCTATGGCAGTTAGAAGAGTTTTAAAAAGGGACCTTAAACGCATTGCC
AAAGCTTCTGGAGCAACTATTCTGTCAACCCTGGCCAATTTGGAAGGTGAAGAAACTTTTGAAGCTGCAATGTTGGGACA
GGCAGAAGAAGTGGTACAGGAGAGAATTTGTGATGATGAGCTGATCTTAATCAAAAATACTAAGGCTCGTACATCTGCAT
CGATTATCTTACGTGGGGCAAATGATTTCATGTGTGATGAGATGGAGCGCTCTTTACATGATGCACTTTGTGTAGTGAAG
AGAGTTTTGGAGTCAAAATCTGTGGTTCCCGGTGGGGGTGCTGTAGAAGCAGCCCTTTCCATATACCTTGAAAACTATGC
AACCAGCATGGGGTCTCGGGAACAGCTTGCGATTGCAGAGTTTGCAAGATCACTTCTTGTTATTCCCAATACACTAGCAG
TTAATGCTGCCCAGGACTCCACAGATCTGGTTGCAAAATTAAGAGCTTTTCATAATGAGGCCCAGGTTAACCCAGAACGT
AAAAATCTAAAATGGATTGGTCTTGATTTGAGCAATGGTAAACCTCGAGACAACAAACAAGCAGGGGTGTTTGAACCAAC
CATAGTTAAAGTTAAGAGTTTGAAATTTGCAACAGAAGCTGCAATCACCATTCTTCGAATTGATGATCTTATTAAATTAC
ATCCAGAAAGTAAAGATGATAAACATGGAAGTTACGAAGATGCTGTTCACTCTGGAGCCCTTAATGATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 93 .03 RPM
SRP007412_cerebellum 61 .11 RPM
SRP007412_heart 21 .95 RPM
SRP007412_kidney 79 .12 RPM
SRP007412_liver 41 .89 RPM
SRP007412_testis 276 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015405 ortholog_one2one 1 retrogene
retro_amel_828,
Callithrix jacchus ENSCJAG00000011792 ortholog_one2one 2 retrogenes
retro_cjac_1867, retro_cjac_2193,
Equus caballus ENSECAG00000017953 ortholog_one2one 1 retrogene
retro_ecab_798,
Homo sapiens ENSG00000120438 ortholog_one2one 1 retrogene
retro_hsap_3722,
Microcebus murinus ENSMICG00000007998 ortholog_one2one 1 retrogene
retro_mmur_795,
Macaca mulatta ENSMMUG00000012846 ortholog_one2many 1 retrogene
retro_mmul_1696,
Oryctolagus cuniculus ENSOCUG00000013847 ortholog_one2one 1 retrogene
retro_ocun_1577,
Pongo abelii ENSPPYG00000017146 ortholog_one2one 1 retrogene
retro_pabe_3135,
Pan troglodytes ENSPTRG00000018760 ortholog_one2one 1 retrogene
retro_ptro_2617,
Pteropus vampyrus ENSPVAG00000005316 ortholog_one2one 1 retrogene
retro_pvam_522,
Sorex araneus ENSSARG00000002463 ortholog_one2one 1 retrogene
retro_sara_624,
Sarcophilus harrisii ENSSHAG00000015128 ortholog_one2many 1 retrogene
retro_shar_830,
Ictidomys tridecemlineatus ENSSTOG00000005572 ortholog_one2one 1 retrogene
retro_itri_1274,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2514 88.97 76.44
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Download FASTA sequences of all ENSGGOG00000014063 retrocopies