Parental gene:

CHIC2, ENSLACG00000006603

Aliases:None
Description:None
Organism:Coelacanth (Latimeria chalumnae)
Coordinates:JH128279.1:226607..266290(-)


>ENSLACG00000006603
ATGGCGGATTTCGATGAGATCTACGAGGAGGAAGAGGACGAAGAAAGAGCCCTGGAGGAGCAGCTTCTCAAATACTCCCC
GGACCCCGTGGTAGTCCGTGGCTCTGGCCACGTCACCGTGTTTGGACTTAGCAACAAGTTTGAATCTGAGTTTCCATCGT
CGCTAACAGGAAAGGTTGCACCTGAGGAGTTCAAAGCCAGCATTAATCGAGTTAATAGTTGTCTGAAGAAGAATCTTCCA
GTCAATGTACGGTGGCTCCTTTGTGGCTGCCTCTGTTGTTGTTGTACTTTGGGTTGCAGTATGTGGCCGGTCATTTGTCT
CAGTAAGAGAACACGAAGATCGATCGAGAAGTTATTAGAATGGGAAAACAATAGGTTATACCACAAGCTGTGCTTGCACT
GGAGGCTGAGCAAAAGGAAATGCGAAACGAATAACATGATGGAATATGTCATTCTTATAGAATTTTTACCGAAGACACCA
ATCTTTCGACCAGATTAG

Library Parental gene expression (RPM)
DRP000627_pectoral_fin 1 .03 RPM
DRP000627_kidney 0 .35 RPM
DRP000627_pelvic_fin 0 .65 RPM
DRP000627_pharynx 0 .41 RPM
DRP000627_gill 0 .32 RPM
DRP000627_tail_muscle 0 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000024493 ortholog_one2one 1 retrogene
retro_cpor_1448,
Echinops telfairi ENSETEG00000004296 ortholog_one2one 1 retrogene
retro_etel_1804,
Loxodonta africana ENSLAFG00000012248 ortholog_one2one 1 retrogene
retro_lafr_953,
Macaca mulatta ENSMMUG00000006382 ortholog_one2one 1 retrogene
retro_mmul_1372,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lcha_22 85.54 50.30
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Download FASTA sequences of all ENSLACG00000006603 retrocopies