Parental gene: | CHIC2, ENSLACG00000006603 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH128279.1:226607..266290(-) |
>ENSLACG00000006603
ATGGCGGATTTCGATGAGATCTACGAGGAGGAAGAGGACGAAGAAAGAGCCCTGGAGGAGCAGCTTCTCAAATACTCCCC
GGACCCCGTGGTAGTCCGTGGCTCTGGCCACGTCACCGTGTTTGGACTTAGCAACAAGTTTGAATCTGAGTTTCCATCGT
CGCTAACAGGAAAGGTTGCACCTGAGGAGTTCAAAGCCAGCATTAATCGAGTTAATAGTTGTCTGAAGAAGAATCTTCCA
GTCAATGTACGGTGGCTCCTTTGTGGCTGCCTCTGTTGTTGTTGTACTTTGGGTTGCAGTATGTGGCCGGTCATTTGTCT
CAGTAAGAGAACACGAAGATCGATCGAGAAGTTATTAGAATGGGAAAACAATAGGTTATACCACAAGCTGTGCTTGCACT
GGAGGCTGAGCAAAAGGAAATGCGAAACGAATAACATGATGGAATATGTCATTCTTATAGAATTTTTACCGAAGACACCA
ATCTTTCGACCAGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_gill | 0 .32 RPM |
| DRP000627_kidney | 0 .35 RPM |
| DRP000627_pectoral_fin | 1 .03 RPM |
| DRP000627_pelvic_fin | 0 .65 RPM |
| DRP000627_pharynx | 0 .41 RPM |
| DRP000627_tail_muscle | 0 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000024493 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000004296 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000012248 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006382 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_22 | 85.54 | 50.30 | Please wait, loading  |
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Download FASTA sequences of all ENSLACG00000006603 retrocopies