Parental gene:

RPS3A, ENSMICG00000004921

Aliases:None
Description:ribosomal protein S3A [Source:HGNC Symbol;Acc:10421]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_2408:42740..46813(+)


>ENSMICG00000004921
ATGGCGGTCGGCAAGAACAAGCGCCTTACGAAAGGCGGCAAAAAGGGAGCCAAGAAGAAAGTGGTTGATCCATTTTCTAA
AAAAGATTGGTATGATGTGAAGGCACCTGCTATGTTCAATATAAGAAATATTGGGAAAACACTAGTCACCAGGACTCAAG
GAACGAAAATTGCCTCCGATGGCCTCAAGGGTCGTGTGTTTGAAGTGAGCCTTGCTGATCTGCAAAATGATGAAGTTGCA
TTTAGAAAATTCAAGCTGATTACTGAAGATGTTCAGGGCAAAAACTGTCTGACTAATTTTCATGGCATGGACCTTACCCG
TGACAAAATGTGTTCCATGGTTAAAAAATGGCAGACTATGATCGAAGCTCACGTTGATGTCAAGACTACCGATGGTTATT
TGCTTCGTCTGTTCTGTGTTGGTTTTACTAAAAAGCGCAACAATCAGATACGGAAGACCTCTTATGCTCAGCACCAACAG
GTCCGCCAAATCCGGAAGAAGATGATGGAAATCATGACCAGAGAGGTGCAGACAAATGACTTGAAAGAAGTAGTCAATAA
ATTGATTCCAGACAGCATTGGAAAAGACATAGAAAAGGCTTGCCAATCTATTTATCCTCTCCATGATGTCTTCGTTAGAA
AAGTAAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGCTTCATGGTGAAGGTAGTAGTTCTGGAAAA
GCTACTGGTGATGAGACAGGCGCTAAAGTTGAACGAGCTGATGGATATGAACCACCAGTCCAAGAATCTGTTTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018425 ortholog_one2one 11 retrogenes
retro_amel_1333, retro_amel_1361, retro_amel_1380, retro_amel_1514, retro_amel_159, retro_amel_1697, retro_amel_1732, retro_amel_1739, retro_amel_230, retro_amel_367, retro_amel_863,
Bos taurus ENSBTAG00000009908 ortholog_one2one 3 retrogenes
retro_btau_1284, retro_btau_1733, retro_btau_233,
Canis familiaris ENSCAFG00000007990 ortholog_one2one 7 retrogenes
retro_cfam_103, retro_cfam_146, retro_cfam_169, retro_cfam_170, retro_cfam_179, retro_cfam_222, retro_cfam_77,
Callithrix jacchus ENSCJAG00000002268 possible_ortholog 7 retrogenes
retro_cjac_2, retro_cjac_21, retro_cjac_249, retro_cjac_312, retro_cjac_337, retro_cjac_368, retro_cjac_78,
Macaca mulatta ENSMMUG00000021821 possible_ortholog 1 retrogene
retro_mmul_2297,
Monodelphis domestica ENSMODG00000000969 ortholog_one2one 6 retrogenes
retro_mdom_1040, retro_mdom_1229, retro_mdom_1396, retro_mdom_1480, retro_mdom_627, retro_mdom_694,
Mus musculus ENSMUSG00000028081 possible_ortholog 2 retrogenes
retro_mmus_218, retro_mmus_254,
Oryctolagus cuniculus ENSOCUG00000007011 possible_ortholog 1 retrogene
retro_ocun_257,
Rattus norvegicus ENSRNOG00000011893 possible_ortholog 1 retrogene
retro_rnor_198,
Sarcophilus harrisii ENSSHAG00000015088 ortholog_one2many 2 retrogenes
retro_shar_777, retro_shar_95,
Vicugna pacos ENSVPAG00000004235 ortholog_one2one 8 retrogenes
retro_vpac_253, retro_vpac_31, retro_vpac_322, retro_vpac_439, retro_vpac_486, retro_vpac_497, retro_vpac_529, retro_vpac_88,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_193 71.62 54.92
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2. retro_mmur_299 97.73 100.00
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3. retro_mmur_330 75.71 91.29
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4. retro_mmur_526 87.41 54.17
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5. retro_mmur_592 94.72 100.00
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6. retro_mmur_626 58.68 62.12
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7. retro_mmur_945 96.21 100.00
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8. retro_mmur_1230 81.20 100.00
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9. retro_mmur_1289 55.77 58.33
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Download FASTA sequences of all ENSMICG00000004921 retrocopies