Parental gene:

MMU.2803, ENSMMUG00000003029

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:19:55954688..55961571(+)


>ENSMMUG00000003029
ATGGTAGGCATGGCTGAGGTGTCCTGTGGCCAGGCGGAAAGCAGCGAGAAGCCCAATGCTGAGGACATGACATCCAAAGA
TTACTACTTTGACTCCTACGCCCACTTTGGCATCCACGAGGAGATGTTGAAGGACGAGGTGCGTACCCTCACGTACCGCA
ACTCCATGTTTCACAACCGGCACCTCTTCAAGGACAAGGTGGTGCTGGACGTCGGCTCGGGCACCGGCATCCTCTGCATG
TTCGCCGCCAAGGCCGGGGCCCGCAAGGTCATTGGGATCGAGTGTTCCAGTATCTCTGATTATGCGGTGAAGATCGTCAA
AGCCAACAAGTTAGACCACGTGGTGACCATCATCAAGGGGAAGGTGGAGGAGGTAGAGCTCCCGGTGGAGAAGGTGGACA
TCATCATCAGCGAGTGGATGGGCTACTGCCTCTTCTACGAGTCCATGCTCAACACCGTGCTCTACGCCCGGGACAAGTGG
CTGGCGCCCGATGGCCTCATCTTCCCAGACCGGGCCACGCTGTATGTGACGGCCATCGAGGACCGGCAGTACAAAGACTA
CAAGATCCACTGGTGGGAGAACGTGTATGGCTTCGACATGTCTTGCATCAAAGATGTGGCCATCAAGGAGCCCCTAGTGG
ATGTGGTGGACCCCAAACAGCTGGTCACCAATGCCTGCCTCATAAAGGAGGTGGACATCTACACCGTCAAGGTGGAAGAC
CTGACGTTCACCTCCCCGTTCTGCCTGCAAGTGAAGCGGAATGACTACGTGCACGCCCTGGTGGCCTACTTCAACATCGA
GTTCACGCGCTGCCACAAGAGGACGGGCTTCTCCACCAGCCCTGAGTCCCCGTACACGCACTGGAAGCAGACAGTGTTCT
ACATGGAGGACTACCTGACCGTGAAGACGGGCGAGGAGATCTTCGGCACCATCGGCATGCGGCCCAATGCCAAGAACAAC

Library Parental gene expression (RPM)
SRP007412_brain 30 .14 RPM
SRP007412_brain_prefrontal_cortex 88 .93 RPM
SRP007412_cerebellum 42 .81 RPM
SRP007412_heart 51 .47 RPM
SRP007412_kidney 34 .04 RPM
SRP007412_liver 39 .39 RPM
SRP007412_testis 27 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003670 possible_ortholog 3 retrogenes
retro_cjac_1800, retro_cjac_1979, retro_cjac_764,
Danio rerio ENSDARG00000010246 ortholog_one2one 1 retrogene
retro_drer_7,
Felis catus ENSFCAG00000006081 ortholog_one2one 1 retrogene
retro_fcat_1762,
Homo sapiens ENSG00000126457 ortholog_one2one 1 retrogene
retro_hsap_3406,
Gasterosteus aculeatus ENSGACG00000004897 ortholog_one2one 1 retrogene
retro_gacu_2,
Gorilla gorilla ENSGGOG00000000503 ortholog_one2one 1 retrogene
retro_ggor_2305,
Otolemur garnettii ENSOGAG00000011938 ortholog_one2one 2 retrogenes
retro_ogar_2471, retro_ogar_2929,
Rattus norvegicus ENSRNOG00000026109 ortholog_one2one 2 retrogenes
retro_rnor_1077, retro_rnor_2668,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2121 79.85 84.06
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Download FASTA sequences of all ENSMMUG00000003029 retrocopies