Parental gene:

PPA1, ENSMMUG00000006397

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:66778912..66808479(+)


>ENSMMUG00000006397
ATGAGCGGCTTCAGTACCGAGGAGCGCGCCGCTCCCTTCTCCCTGGAGTACCGAGTATTCCTCAAAAATGAGAAAGGACA
ATATATATCTCCATTTCATGATATTCCAATTTATGCAGATAAGGATGTGTTCCACATGGTAGTTGAAGTGCCACGCTGGT
CTAATGCAAAAATGGAGATTGCTACAAAGGACCCTTTAAACCCCATTAAACAAGATGTGAAGAAAGGAAAACTTCGCTAT
GTTGCGAATTTGTTCCCGTACAAAGGATATATCTGGAACTATGGTGCCATCCCTCAGACTTGGGAAGACCCAGGGCACAA
TGATAAACATACTGGCTGTTGTGGTGACAATGACCCAATTGATGTGTGTGAAATTGGAAGCAAGGTATGTGCAAGAGGTG
AAATAATTGGCGTGAAAGTTCTAGGCATATTGGCTATGATTGATGAAGGGGAAACCGACTGGAAAGTCATTGCCATTAAT
GTGGATGATCCTGATGCAGCCAACTATAATGATATCAATGATGTCAAACGGCTGAAACCTGGCTACTTGGAAGCTACTGT
GGACTGGTTTAGAAGGTATAAGGTTCCTGATGGAAAACCAGAAAACGAGTTTGCTTTTAATGCAGAATTTAAAGATAAGG
ACTTTGCAATTGATATTATTAAAAGCACTCATGACCATTGGAAAGCATTAGTGACTAAGAAAACGAATGGAAAAGGAATC
AGTTGCATGAATACAACTGTGTCTGAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAGAGCCATTGTGGATGCTTTACC
ACCACCCTGTGAATCTGCTTGCACAGTACCAACAGATGTGGATAAGTGGTTCCATCACCAGAAAAACTAA

Library Parental gene expression (RPM)
SRP007412_brain 100 .51 RPM
SRP007412_brain_prefrontal_cortex 63 .15 RPM
SRP007412_cerebellum 95 .12 RPM
SRP007412_heart 31 .15 RPM
SRP007412_kidney 31 .45 RPM
SRP007412_liver 92 .43 RPM
SRP007412_testis 29 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000014023 ortholog_one2one 1 retrogene
retro_cpor_615,
Homo sapiens ENSG00000180817 ortholog_one2one 2 retrogenes
retro_hsap_2756, retro_hsap_3267,
Loxodonta africana ENSLAFG00000004048 ortholog_one2one 1 retrogene
retro_lafr_990,
Myotis lucifugus ENSMLUG00000017790 ortholog_one2one 1 retrogene
retro_mluc_2469,
Macaca mulatta ENSMMUG00000017004 within_species_paralog 1 retrogene
retro_mmul_1278,
Nomascus leucogenys ENSNLEG00000016098 possible_ortholog 1 retrogene
retro_nleu_7,
Oryctolagus cuniculus ENSOCUG00000016001 ortholog_one2one 2 retrogenes
retro_ocun_1373, retro_ocun_883,
Procavia capensis ENSPCAG00000006788 ortholog_one2one 1 retrogene
retro_pcap_247,
Pan troglodytes ENSPTRG00000002585 ortholog_one2one 2 retrogenes
retro_ptro_1864, retro_ptro_2210,
Tupaia belangeri ENSTBEG00000008947 ortholog_one2one 3 retrogenes
retro_tbel_3560, retro_tbel_3561, retro_tbel_848,
Tarsius syrichta ENSTSYG00000005511 ortholog_one2one 1 retrogene
retro_tsyr_1856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1540 85.62 100.00
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Download FASTA sequences of all ENSMMUG00000006397 retrocopies