Parental gene:

MRPL40, ENSMMUG00000016081

Aliases:None
Description:39S ribosomal protein L40, mitochondrial [Source:RefSeq peptide;Acc:NP_001253344]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:10:63475248..63479334(+)


>ENSMMUG00000016081
ATGACGGCCTACGTGCTGCGAGGTGTCTCGCTAACCCTGCGCCCGACGAGCGGGCTTCTGGGAACTTGGCAGAGGCAGAT
TAGAAATACTCACCAGCGAGCATCATTGTTGTCTTTCTGGGAACTCATTCCCATGAGATCAGAACCTCTTCGAAAGAAGA
AGAAGGTAGATCCTAAAAAAGACCAAGCAGCAAAGGAGCGCTTGAAAAGAAGGATCCGAAAACTGGAAAAGGCTAGTCAA
GAGCTAATTCCTATTGAAGATTTTATTACCCCTCTAAAGTTCTTGGATAAAGCAAGACAGCGGCCTCAGGTGGAGCTCAC
CTTTGAGGAGACTGAGAGGAGAGCTCTGCTTCTGAAGAAGTGGTCCTTGTACAAGCAGCAAGAGCATAAGATGGAGAGGG
ACACCATCAGGGCCATGCTAGAAGCCCAGCAGGAAGCTCTTGAGGAACTGCGACTCGAGTCCCCGAAGCTCCATGCTGAG
GCCATCAAGCGGGATCCCAACCTGTTCCCCTTTGAGAGGGAAGGGCCATGTTACACACCACCGATCCCTAACTACCAGCC
CCCTGAAGGCAAGTACAGTGACGTCACCAAGGTGTACACACAAGTGGAGTTTAAGAAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .34 RPM
SRP007412_brain 17 .26 RPM
SRP007412_cerebellum 13 .11 RPM
SRP007412_heart 17 .78 RPM
SRP007412_kidney 22 .89 RPM
SRP007412_liver 21 .34 RPM
SRP007412_testis 16 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001053 ortholog_one2many 1 retrogene
retro_acar_149,
Ailuropoda melanoleuca ENSAMEG00000011421 ortholog_one2many 1 retrogene
retro_amel_257,
Callithrix jacchus ENSCJAG00000001584 ortholog_one2many 1 retrogene
retro_cjac_3220,
Equus caballus ENSECAG00000009876 ortholog_one2many 1 retrogene
retro_ecab_687,
Homo sapiens ENSG00000185608 ortholog_one2many 1 retrogene
retro_hsap_1020,
Gorilla gorilla ENSGGOG00000012336 ortholog_one2many 1 retrogene
retro_ggor_807,
Myotis lucifugus ENSMLUG00000002456 ortholog_many2many 1 retrogene
retro_mluc_1950,
Mustela putorius furo ENSMPUG00000003865 ortholog_one2many 1 retrogene
retro_mputfur_394,
Nomascus leucogenys ENSNLEG00000005372 ortholog_one2many 1 retrogene
retro_nleu_899,
Pongo abelii ENSPPYG00000011578 ortholog_one2many 1 retrogene
retro_pabe_857,
Rattus norvegicus ENSRNOG00000049686 ortholog_one2many 1 retrogene
retro_rnor_1624,
Tarsius syrichta ENSTSYG00000014747 ortholog_one2many 1 retrogene
retro_tsyr_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_57 94.33 94.17
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Download FASTA sequences of all ENSMMUG00000016081 retrocopies