Parental gene: | MMU.4375, ENSMMUG00000016840 |
| Aliases: | None |
| Description: | dual specificity mitogen-activated protein kinase kinase 1 [Source:RefSeq peptide;Acc:NP_001244478] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 7:44913581..45025647(+) |
>ENSMMUG00000016840
ATGCCCAAGAAGAAGCCGACGCCCATCCAGCTGAACCCGGCCCCCGACGGCTCCGCGGTTAACGGGACCAGCTCTGCGGA
GACCAACTTGGAGGCCTTGCAGAAGAAGCTGGAGGAGCTAGAGCTTGATGAGCAGCAGCGAAAGCGCCTTGAGGCCTTTC
TCACCCAGAAGCAGAAGGTGGGAGAACTGAAGGATGACGACTTTGAGAAGATCAGTGAGCTGGGGGCCGGCAATGGCGGT
GTGGTGTTCAAGGTCTCCCACAAGCCTTCTGGCCTGGTCATGGCCAGAAAGCTAATTCATCTGGAGATCAAACCCGCAAT
CCGGAACCAGATCATAAGGGAACTGCAGGTGCTGCATGAGTGCAACTCTCCATACATCGTGGGCTTCTATGGTGCATTCT
ACAGTGATGGCGAGATCAGTATCTGCATGGAGCACATGGATGGAGGTTCTCTGGATCAAGTCCTGAAGAAAGCTGGAAGA
ATTCCTGAACAAATTTTAGGAAAAGTTAGCATTGCTGTGATAAAAGGCCTGACATATCTGAGGGAGAAGCACAAGATCAT
GCACAGAGATGTCAAGCCCTCCAACATCCTAGTCAACTCCCGTGGGGAGATCAAGCTCTGTGACTTTGGGGTCAGCGGGC
AGCTCATCGACTCCATGGCCAACTCCTTCGTGGGCACAAGGTCCTACATGTCGCCAGAAAGACTCCAGGGGACTCATTAC
TCTGTGCAGTCAGACATCTGGAGCATGGGACTCTCTCTGGTAGAGATGGCGGTTGGGAGGTATCCCATCCCTCCTCCAGA
TGCCAAGGAGCTAGAACTGATGTTTGGGTGCCAGGTGGAGGGAGATGCGGCTGAGACCCCACCTAGGCCAAGGACCCCCG
GGAGGCCCCTTAGCTCATATGGAATGGACAGCCGACCTCCCATGGCAATTTTTGAGTTGTTGGATTACATAGTCAACGAG
CCTCCTCCGAAATTGCCCAGTGGAGTTTTCAGTCTGGAATTTCAAGATTTTGTGAATAAATGCTTAATAAAAAACCCCGC
AGAGAGAGCAGATTTGAAGCAACTCATGGTTCATGCTTTTATCAAGAGATCTGATGCTGAGGAAGTGGATTTTGCAGGTT
GGCTCTGCTCCACTATCGGCCTTCACCAGCCCAGCACACCAACCCATGCTGCTGGCGTCTAA
ATGCCCAAGAAGAAGCCGACGCCCATCCAGCTGAACCCGGCCCCCGACGGCTCCGCGGTTAACGGGACCAGCTCTGCGGA
GACCAACTTGGAGGCCTTGCAGAAGAAGCTGGAGGAGCTAGAGCTTGATGAGCAGCAGCGAAAGCGCCTTGAGGCCTTTC
TCACCCAGAAGCAGAAGGTGGGAGAACTGAAGGATGACGACTTTGAGAAGATCAGTGAGCTGGGGGCCGGCAATGGCGGT
GTGGTGTTCAAGGTCTCCCACAAGCCTTCTGGCCTGGTCATGGCCAGAAAGCTAATTCATCTGGAGATCAAACCCGCAAT
CCGGAACCAGATCATAAGGGAACTGCAGGTGCTGCATGAGTGCAACTCTCCATACATCGTGGGCTTCTATGGTGCATTCT
ACAGTGATGGCGAGATCAGTATCTGCATGGAGCACATGGATGGAGGTTCTCTGGATCAAGTCCTGAAGAAAGCTGGAAGA
ATTCCTGAACAAATTTTAGGAAAAGTTAGCATTGCTGTGATAAAAGGCCTGACATATCTGAGGGAGAAGCACAAGATCAT
GCACAGAGATGTCAAGCCCTCCAACATCCTAGTCAACTCCCGTGGGGAGATCAAGCTCTGTGACTTTGGGGTCAGCGGGC
AGCTCATCGACTCCATGGCCAACTCCTTCGTGGGCACAAGGTCCTACATGTCGCCAGAAAGACTCCAGGGGACTCATTAC
TCTGTGCAGTCAGACATCTGGAGCATGGGACTCTCTCTGGTAGAGATGGCGGTTGGGAGGTATCCCATCCCTCCTCCAGA
TGCCAAGGAGCTAGAACTGATGTTTGGGTGCCAGGTGGAGGGAGATGCGGCTGAGACCCCACCTAGGCCAAGGACCCCCG
GGAGGCCCCTTAGCTCATATGGAATGGACAGCCGACCTCCCATGGCAATTTTTGAGTTGTTGGATTACATAGTCAACGAG
CCTCCTCCGAAATTGCCCAGTGGAGTTTTCAGTCTGGAATTTCAAGATTTTGTGAATAAATGCTTAATAAAAAACCCCGC
AGAGAGAGCAGATTTGAAGCAACTCATGGTTCATGCTTTTATCAAGAGATCTGATGCTGAGGAAGTGGATTTTGCAGGTT
GGCTCTGCTCCACTATCGGCCTTCACCAGCCCAGCACACCAACCCATGCTGCTGGCGTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 193 .41 RPM |
| SRP007412_brain | 191 .38 RPM |
| SRP007412_cerebellum | 75 .75 RPM |
| SRP007412_heart | 35 .21 RPM |
| SRP007412_kidney | 43 .66 RPM |
| SRP007412_liver | 24 .78 RPM |
| SRP007412_testis | 16 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000033983 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003053 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003687 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000015876 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000007770 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006576 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007193 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2285 | 86.86 | 69.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000016840 retrocopies