Parental gene:

CXorf56, ENSMMUG00000022665

Aliases:None
Description:chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:26239]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:117807252..117832171(-)


>ENSMMUG00000022665
NCGAAAGTAGTGTCTCGGTCAGTAGTCTGCTCTACTCGGGACCGGGAGGAATATGACGACGGCGAGAAGCCCCTCCATGT
TTACTACTGTTTGTGCGGCCAGATGGTCCTAGTGCTGGACTGCCAGTTAGAGAAATTGCCCATGAGGCCCCGGGACCGGT
CCCGTGTGATTGATGCTGCCAAACATGCCCATAAGTTTTGTAACACAGAAGACGAGGAGACTATGTATCTGCGGAGACCT
GAAGGCATTGAACGACAGTACAGGAAGAAATGTGCAAAGTGTGGACTGCCGCTCTTCTACCAATCCCAGCCGAAGAATGC
TCCCGTTACCTTCATTGTGGATGGAGCGGTAGTCAAGTTTGGCCAGGGCTTTGGGAAGACGAACATATATACTCAGAAAC
AAGAGCCTCCTAAGAAGGTGATGATGACCAAACGGACCAAAGACATGGGCAAGTTCAGTTCTGTCACTGTGTCTACCATT
GATGAAGAGGAAGAGGAGATTGAGGCCAGGGAAGTTGCTGACTCATATGCACAGAATGCCAAAGTGATTGAAAAACAGCT
GGAGCGCAAAGGCATGAGCAAGAGGCGACTGCAAGAGCTGGCTGAACTGGAAGCCAAGAAAGCGAAAATGAAGGGGACCT
TGATTGACAACCAGTTCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .65 RPM
SRP007412_brain 10 .98 RPM
SRP007412_cerebellum 5 .49 RPM
SRP007412_heart 6 .54 RPM
SRP007412_kidney 5 .05 RPM
SRP007412_liver 3 .29 RPM
SRP007412_testis 8 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005111 possible_ortholog 1 retrogene
retro_cjac_311,
Homo sapiens ENSG00000018610 ortholog_one2one 1 retrogene
retro_hsap_4044,
Gorilla gorilla ENSGGOG00000013324 ortholog_one2one 1 retrogene
retro_ggor_2711,
Latimeria chalumnae ENSLACG00000012468 ortholog_one2many 1 retrogene
retro_lcha_59,
Myotis lucifugus ENSMLUG00000015751 possible_ortholog 1 retrogene
retro_mluc_72,
Mus musculus ENSMUSG00000006423 ortholog_one2one 1 retrogene
retro_mmus_1715,
Nomascus leucogenys ENSNLEG00000014862 ortholog_one2one 1 retrogene
retro_nleu_2057,
Otolemur garnettii ENSOGAG00000012474 ortholog_one2one 1 retrogene
retro_ogar_145,
Pongo abelii ENSPPYG00000020670 possible_ortholog 1 retrogene
retro_pabe_177,
Pan troglodytes ENSPTRG00000022224 possible_ortholog 1 retrogene
retro_ptro_104,
Sorex araneus ENSSARG00000003163 ortholog_one2one 1 retrogene
retro_sara_5,
Sarcophilus harrisii ENSSHAG00000006319 ortholog_one2many 1 retrogene
retro_shar_16,
Ictidomys tridecemlineatus ENSSTOG00000011579 ortholog_one2one 1 retrogene
retro_itri_103,
Tursiops truncatus ENSTTRG00000013101 ortholog_one2one 2 retrogenes
retro_ttru_231, retro_ttru_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2333 98.22 76.82
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Download FASTA sequences of all ENSMMUG00000022665 retrocopies